LOCUS BX537955 4367 bp mRNA linear HUM 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686E1430 (from clone DKFZp686E1430);
complete cds.
ACCESSION BX537955
VERSION BX537955.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4367)
AUTHORS Poustka A., Albert R., Moosmayer P., Schupp I., Wellenreuther R.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
JOURNAL Submitted (17-JUN-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by DKFZ (German Cancer Research Center,
Heidelberg/Germany) within the cDNA sequencing consortium of
the German Genome Project.
This clone (DKFZp686E1430) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..4367
/db_xref="H-InvDB:HIT000054739"
/organism="Homo sapiens"
/map="17q23.3"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686E1430"
/tissue_type="human testis"
/db_xref="taxon:9606"
CDS 722..3133
/codon_start=1
/gene="DKFZp686E1430"
/product="hypothetical protein"
/note="POB1 protein, differentially spliced"
/db_xref="GOA:O94972"
/db_xref="H-InvDB:HIT000054739.16"
/db_xref="HGNC:HGNC:7523"
/db_xref="InterPro:IPR000315"
/db_xref="InterPro:IPR001841"
/db_xref="InterPro:IPR002083"
/db_xref="InterPro:IPR003649"
/db_xref="InterPro:IPR008974"
/db_xref="InterPro:IPR013083"
/db_xref="InterPro:IPR037299"
/db_xref="PDB:3LRQ"
/db_xref="UniProtKB/Swiss-Prot:O94972"
/protein_id="CAD97922.1"
/translation="MHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVER
NVEAVRNAKDERVREIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQE
VEHQLRSCSKSELISKSSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFV
LENFSTLRQRADPVYSPPLQVSGLCWRLKVYPDGNGVVRGYYLSVFLELSAGLPETSK
YEYRVEMVHQSCNDPTKNIIREFASDFEVGECWGYNRFFRLDLLANEGYLNPQNDTVI
LRFQVRSPTFFQKSRDQHWYITQLEAAQTSYIQQINNLKERLTIELSRTQKSRDLSPP
DNHLSPQNDDALETRAKKSACSDMLLEGGPTTASVREAKEDEEDEEKIQNEDYHHELS
DGDLDLDLVYEDEVNQLDGSSSSASSTATSNTEENDIDEETMSGENDVEYNNMELEEG
ELMEDAAAAGPAGSSHGYVGSSSRISRRTHLCSAATSSLLDIDPLILIHLLDLKDRSS
IENLWGLQPRPPASLLQPTASYSRKDKDQRKQQAMWRVPSDLKMLKRLKTQMAEVRCM
KTDVKNTLSEIKSSSAASGDMQTSLFSADQAALAACGTENSGRLQDLGMELLAKSSVA
NCYIRNSTNKKSNSPKPARSSVAGSLSLRRAVDPGENSRSKGDCQTLSEGSPGSSQSG
SRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVVAVFSGLPAVEKRRKMVTLGANA
KGGHLEGLQMTDLENNSETGELQPVLPEGASAAPEEDTHSSFPDGEQIGPEDLSFNTD
ENSGR"
regulatory 4287..4292
/regulatory_class="polyA_signal_sequence"
polyA_site 4301
BASE COUNT 1299 a 855 c 1021 g 1192 t
ORIGIN
1 ggctgctggc cggcggctga gccgggagaa aggagctgcg gccaccgttc gccctacttc
61 tgcgcctcgg ggcgggcgcg ccggtaaaaa tggcgaaatg ggggtaggcg gcgctggacc
121 tgaagagatg gggcgcgcag gtggggcggt tgtcagagcc ccctgacgtg ggcgccgggc
181 ttttatcggc gatttgatct ggcgacctcg ggccggcgcc taagaggtca gactgcggag
241 cctgcgggtc gccagcggcc ccgccgagag ccggaggcaa tggatgaaca gagcgtggag
301 agcattgctg aggttttccg atgtttcatt tgtatggaga aattgcggga tgcacgcctg
361 tgtcctcatt gctccaaact gtgttgtttc agctgtatta ggcgctggct gacagagcag
421 agagctcaat gtcctcattg ccgagtctcg ctctgtcgtc caggccggag tgcaatggcg
481 tgatttcagc tcactgcagc ctcgacctcc tgggctcagt gctccactcc agctacgaga
541 actagtaaat tgtcgttggg cagaagaagt aacacaacag cttgatactc ttcaactctg
601 cagtctcacc aaacatgaag aaaatgaaaa ggacaaatgt gaaaatcacc atgaaaaact
661 tagtgtattt tgctggactt gtaagaagtg tatctgccat cagtgtgcac tttggggagg
721 aatgcatggc ggacatacct ttaaaccttt ggcagaaatt tatgagcaac acgtcactaa
781 agtgaatgaa gaggtagcca aacttcgtcg gcgtctcatg gaactgatca gcttagttca
841 agaagtggaa aggaatgtag aagctgtaag aaatgcaaaa gatgagcgtg ttcgggaaat
901 taggaatgca gtggagatga tgattgcacg gttagacaca cagctgaaga ataagcttat
961 aacactgatg ggtcagaaga catctctaac ccaagaaaca gagcttttgg aatccttact
1021 tcaggaggtg gagcaccagt tgcggtcttg tagtaagagt gagttgatat ctaagagctc
1081 agagatcctt atgatgtttc agcaagttca tcggaagccc atggcatctt ttgttaccac
1141 tcctgttcca ccagacttta ccagtgaatt agtgccatct tacgattcag ctacttttgt
1201 tttagagaat ttcagcactt tgcgtcagag agcagatcct gtttacagtc cacctcttca
1261 agtttcagga ctttgctgga ggttaaaagt ttacccagat ggaaatggag ttgtgcgagg
1321 ttactactta tctgtgtttc tggagctctc agctggcttg cctgaaactt ctaaatatga
1381 atatcgtgta gagatggttc accagtcctg taatgatcct acaaaaaata tcattcgaga
1441 atttgcatct gactttgaag ttggagaatg ctggggctat aatagatttt tccgtttgga
1501 cttactcgca aatgaaggat acttgaatcc acaaaatgat acagtgattt taaggtttca
1561 ggtacgttca ccaactttct ttcaaaaatc ccgggaccag cattggtaca ttactcagtt
1621 ggaagctgca cagactagtt atatccaaca aataaacaac cttaaagaga gacttactat
1681 tgagctgtct cgaactcaga agtcaagaga tttgtcacca ccagataacc atcttagccc
1741 ccaaaatgat gatgctctgg agacacgagc taagaagtct gcatgctctg acatgcttct
1801 cgaaggtggt cctactacag cttctgtaag agaggccaaa gaggatgaag aagatgagga
1861 gaagattcag aatgaagatt atcatcacga gctttcagat ggagatctgg atctggatct
1921 tgtttatgag gatgaagtaa atcagctcga tggcagcagt tcctctgcta gttccacagc
1981 aacaagtaat acagaagaaa atgatattga tgaagaaact atgtctggag aaaatgatgt
2041 ggaatataac aacatggaat tagaagaggg agaactcatg gaagatgcag ctgctgcagg
2101 acccgcaggt agtagccatg gttatgtggg ttccagtagt agaatatcaa gaagaacaca
2161 tttatgctcc gctgctacca gtagtttact agacattgat ccattaattt taatacattt
2221 gttggacctt aaggaccgga gcagtataga aaatttgtgg ggcttacagc ctcgcccacc
2281 tgcttcactt ctgcagccca cagcatcata ttctcgaaaa gataaagacc aaaggaagca
2341 acaggcaatg tggcgagtgc cctctgattt aaagatgcta aaaagactca aaactcaaat
2401 ggccgaagtt cgatgtatga aaactgatgt aaagaataca ctttcagaaa taaaaagcag
2461 cagtgctgct tctggagaca tgcagacaag ccttttttct gctgaccagg cagctctggc
2521 tgcatgtgga actgaaaact ctggcagatt gcaggatttg ggaatggaac tcctggcaaa
2581 gtcatcagtt gccaattgtt acatacgaaa ctccacaaat aagaagagta attcgcccaa
2641 gccagctcga tccagtgtag caggtagtct atcacttcga agagcagtgg accctggaga
2701 aaatagtcgt tcaaagggag actgtcagac tctgtctgaa ggctccccag gaagctctca
2761 gtctgggagc aggcacagtt ctccccgagc cttgatacat ggcagtatcg gtgatattct
2821 gccaaaaact gaagaccggc agtgtaaagc tttggattca gatgctgttg tggttgcagt
2881 tttcagtggc ttgcctgcgg ttgagaaaag gaggaaaatg gtcaccttgg gggctaatgc
2941 taaaggaggt catctggaag gactgcagat gactgatttg gaaaataatt ctgaaactgg
3001 agagttacag cctgtactac ctgaaggagc ttcagctgcc cctgaagaag atacacattc
3061 cagttttcct gatggtgaac aaataggccc tgaagatctc agcttcaata cagatgaaaa
3121 tagtggaagg taattgccaa atcaagagaa ctgacttgca agctaccttg accctgaatt
3181 ttgctgtagt tggtgctcaa atttgtcatc agtcagataa tcagatttgg tctatttctt
3241 cattatctcg acctgaaata gtaatttgga aactgttgga aggtggcaca gtttagtcta
3301 agacagcagt agtacatggg aaaaacagta tgggaagagt tctttgtaat gtaaggaaat
3361 aacaatgtag ttctctatta atttagcaaa tttgtacatt cacaaaaggc agtttgtcta
3421 ctacagcaga aggctggtta actgccagaa aatgtacctc caggccctgc atgccgtcag
3481 taacccgccc ggcattggtg ctctactgtc tttggctaga gcttagttgt gtttaaataa
3541 tcatctttat atttggggtt ttaattacag ttccattagt gcctgtagat tagtgaacag
3601 aaaattgctt tggaagagat tctgccctgt agacactatg tgaataactg aagtaacact
3661 agactgaatc tcctttttgg agtatgtatc ttctctcact tgttcaagta caggcacact
3721 gttcaaccgc atggtatctt tctgttgtgt gacttctaca aatgtaattt taaatgaaat
3781 taagttaaca tggattcatt acgttcctgg ccctgtagac acgtgtaaga ttatttaaaa
3841 ttctttcatt tttttctgcc tcttactata cgactgtagt gcaacaaata ttttaaagcc
3901 cccttttctt ctttattttc attagttgta cattgatttc agtgtcaaca catttaaaga
3961 ttcattcatg ttgcacagtg gcttacatga acgtgaaact gtgatataag gttttctttc
4021 atactcataa ttagcccaaa acagttgcca aactttgcca ttgtgctcct gcatttgtgt
4081 ttgagctgct atatatttgt ggaaattaca ctgaaagttg actaagagac tattgaaaaa
4141 gcatgaataa ttaaatatac atgtgagaga catctcatct gctgtacttt acttagtgaa
4201 tattgttcac tcttccgtgt ctgatgtctt gctgaatgct gtgactcata gtttactttt
4261 gttcaaaata gtttgcactt tttgttaata aaatcaactt gagaaaaaaa aaaaaaaaaa
4321 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//