LOCUS BX537954 8015 bp mRNA linear HUM 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686K091 (from clone DKFZp686K091);
complete cds.
ACCESSION BX537954
VERSION BX537954.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 8015)
AUTHORS Poustka A., Albert R., Moosmayer P., Schupp I., Wellenreuther R.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
JOURNAL Submitted (17-JUN-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by DKFZ (German Cancer Research Center,
Heidelberg/Germany) within the cDNA sequencing consortium of
the German Genome Project.
This clone (DKFZp686K091) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..8015
/db_xref="H-InvDB:HIT000054738"
/organism="Homo sapiens"
/map="10q21.3"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686K091"
/tissue_type="human cervix"
/db_xref="taxon:9606"
CDS 631..7263
/codon_start=1
/gene="DKFZp686K091"
/product="hypothetical protein"
/note="hypothetical protein, differentially spliced"
/db_xref="GOA:Q15652"
/db_xref="H-InvDB:HIT000054738.15"
/db_xref="HGNC:HGNC:12313"
/db_xref="InterPro:IPR003347"
/db_xref="PDB:2YPD"
/db_xref="PDB:5FZO"
/db_xref="UniProtKB/Swiss-Prot:Q15652"
/protein_id="CAD97921.1"
/translation="MIVMNDQVLEPQNVDPSMVQMTFLDDVVHSLLKGENIGITSRRR
SRANQNVNAVHSHYTRAQANSPRPAMNSQAAVPKQNTHQQQQQRSIRPNKRKGSDSSI
PDEEKMKEEKYDYISRGENPKGKNKHLMNKRRKPEEDEKKLNMKRLRTDNVSDFSESS
DSENSNKRIIDNSSEQKPENELKNKNTSKINGEEGKPHNNEKAGEETLKNSQPPWDQI
QEDKKHEEAEKRKSVDTQLQEDMIIHSSEQSTVSDHNSNDLLPQECNMDKAHTMELLP
KEKFVSRPPTPKCVIDITNDTNLEKVAQENSSTFGLQTLQKMDPNVSDSKHSIANAKF
LETAKKDSDQSWVSDVVKVDLTQSSVTNASSGNDHLNMEKEKYVSYISPLSAVSVMED
KLHKRSPPPETIKSKLNTSVDTHKIKSSPSPEVVKPKITHSPDSVKSKATYVNSQATG
ERRLANKIEHELSRCSFHPIPTRSSTLETTKSPLIIDKNEHFTVYRDPALIGSETGAN
HISPFLSQHPFPLHSSSHRTCLNPGTHHPALTPAPHLLAGSSSQTPLPTINAHPLPSG
PHHAVHHPHLLPTVLPGVPTASLLGGHPRLESAHASSLSHLALAHQQQQQLLQHQSPH
LLGQAHPSASYNQLGLYPIIWQYPNGTHAYSGLGLPSSKWVHPENAVNAEASLRRNSP
SPWLHQPTPVTSADGIGLLSHIPVRPSSAEPHRPLKITAHSSPPLTKTLVDHHKEELE
RKAFMEPLRSVASTSAKNDLDLNRSQTGKDCHLHRHFVDPVLNQLQRPPQETGERLNK
YKEEHRRILQESIDVAPFTTKIKGLEGERENYSRVASSSSSPKSHIIKQDMDVERSVS
DLYKMKHSVPQSLPQSNYFTTLSNSVVNEPPRSYPSKEVSNIYGDKQSNALAAAAANP
QTLTSFITSLSKPPPLIKHQPESEGLVGKIPEHLPHQIASHSVTTFRNDCRSPTHLTV
SSTNTLRSMPALHRAPVFHPPIHHSLERKEGSYSSLSPPTLTPVMPVNAGGKVQESQK
PPTLIPEPKDSQANFKSSSEQSLTEMWRPNNNLSKEKTEWHVEKSSGKLQAAMASVIV
RPSSSTKTDSMPAMQLASKDRVSERSSAGAHKTDCLKLAEAGETGRIILPNVNSDSVH
TKSEKNFQAVSQGSVPSSVMSAVNTMCNTKTDVITSAADTTSVSSWGGSEVISSLSNT
ILASTSSECVSSKSVSQPVAQKQECKVSTTAPVTLASSKTGSVVQPSSGFSGTTDFIH
LKKHKAALAAAQYKSSNASETEPNAIKNQTLSASLPLDSTVICSTINKANSVGNGQAS
QTSQPNYHTKLKKAWLTRHSEEDKNTNKMENSGNSVSEIIKPCSVNLIASTSSDIQNS
VDSKIIVDKYVKDDKVNRRKAKRTYESGSESGDSDESESKSEQRTKRQPKPTYKKKQN
DLQKRKGEIEEDLKPNGVLSRSAKERSKLKLQSNSNSCHLVNGVVRIDGFSSPDQYDD
EAMSLWTHENFEDDELDIETSKYILDIIGDKFCQLVTSEKTALPRVKKDAKIAWKRAV
RGVREMCDACEATLFNIHWVCQKCGFVVCLDCYKAKERKSSRDKELYAWMKCVKGQPH
DHKHLMPTQIIPGSVLTDLLDAMHTLREKYGIKSHCHCTNKQNLQVGNFPTMNGVSQS
QQQNTPPKSEKNGGSSPESDVGTDNKLTPPESQSPLHWLADLAEQKAREEKKENKELT
LENQIKEEREQDNSESPNGRTSPLVSQNNEQGSTLRDLLTTTAGKLRVGSTDAGIAFA
PVYSMGAPSSKSGRTMPNILDDIIASVVENKIPPSKTSKINVKPELKEEPEESIISAV
DENNKLYSDIPHSWICEKHILWLKDYKNSSNWKLFKECWKQGQPAVVSGVHKKMNISL
WKAESISLDFGDHQADLLNCKDSIISNANVKEFWDGFEEVSKRQKNKSGETVVLKLKD
WPSGEDFKTMMPARYEDLLKSLPLPEYCNPEGKFNLASHLPGFFVRPDLGPRLCSAYG
VVAAKDHDIGTTNLHIEVSDVVNILVYVGIAKGNGILSKAGILKKFEEEDLDDILRKR
LKDSSEIPGALWHIYAGKDVDKIREFLQKISKEQGLEVLPEHDPIRDQSWYVNKKLRQ
RLLEEYGVRTCTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPEHLVESFHLTQ
ELRLLKEEINYDDKLQSKKW"
regulatory 7971..7976
/regulatory_class="polyA_signal_sequence"
polyA_site 7991
BASE COUNT 2782 a 1553 c 1567 g 2113 t
ORIGIN
1 gactgcactg tgtttccacg cagacagagt acagtgggaa aggctttctc cagctgatgg
61 atggctgttc tctttatttg gagtatctta ctggttatgt aagcgacctc gagagaaatt
121 atcctgaccc agatcggagg atgcagtagt gcttcagctg caggatttct tagtcgttaa
181 caccacagtg ctgatgacaa agagcgagtt gtaatcctca tcactgccag ggctgagcca
241 gagcagacag aaaatcgtca tttgctcgtt ggagacttgt taggttacag ctcctgcttc
301 gttctgtggt cttggctttt cttcctatac aatgacgccg ctgcaagtga gctcagaaat
361 gcttggtttg agagccattt gcctgtgatt tttgaagact aaagaagtat ttacactaga
421 tactcttcca gaacaaaata gaaatttcag caaatactta ctgaccttta aagccttgtt
481 gtggatttct gagatttaaa gatactttaa aattctcaag aacaaagtcc ttattcctta
541 aatggataca gagtgagagt atatagacaa gactctgcca cccagtggtt tactggcata
601 attactcatc atgatctctt cacccgcacc atgatcgtta tgaatgatca ggtactagaa
661 ccacagaatg tcgatccttc tatggttcaa atgacctttc tagatgatgt tgttcactct
721 ttgttaaaag gtgaaaatat tggcattaca tcacgacgca ggtctcgtgc caatcaaaac
781 gtcaacgctg ttcacagcca ttatacacgc gcccaagcaa atagtcccag accagcaatg
841 aactcccaag ctgctgtacc aaaacagaat acacaccagc aacagcaaca aagaagtatc
901 cgtccaaata agaggaaggg ctcagatagc agtataccag atgaagagaa gatgaaggag
961 gaaaaatatg attatatatc acgaggagaa aatcctaaag gtaaaaacaa acacttgatg
1021 aataaaagaa ggaaacctga ggaggatgaa aagaaactaa atatgaaaag acttcgaact
1081 gacaatgttt cagacttttc tgagagcagt gactcagaaa attcaaataa gagaataata
1141 gataattcct cagaacagaa gccagagaat gaattgaaaa ataaaaatac ttcaaaaata
1201 aatggagaag aaggaaaacc ccataataat gagaaggcag gagaagagac cctaaaaaat
1261 agccagcctc cctgggatca aatacaggaa gataaaaaac atgaagaagc agagaagcgg
1321 aagtctgttg acactcagct tcaagaagat atgattattc attcgtcaga acagtccaca
1381 gtttctgatc ataattctaa tgatttactt cctcaggaat gcaatatgga taaagcacat
1441 accatggaat tgctaccaaa ggagaagttt gtatccagac cacccacacc aaaatgtgtt
1501 attgatatta caaatgacac taatttagaa aaggtggctc aggaaaactc aagtaccttt
1561 ggccttcaga cacttcagaa aatggatcct aatgttagtg attcaaaaca ctctattgca
1621 aatgcaaaat tcttggaaac agcaaaaaaa gattctgacc agagctgggt cagtgatgta
1681 gttaaagtgg atctaaccca atcaagtgtt acaaatgctt cttcaggaaa tgatcacttg
1741 aacatggaaa aagagaagta tgtctcttac atttctcctt taagtgcagt ttctgtcatg
1801 gaagataagc tgcataagcg aagtccacct ccagagacta taaaatctaa acttaatact
1861 tcagtagata ctcacaagat aaaatccagc ccatcacctg aagttgttaa acccaaaata
1921 actcattctc ctgattctgt aaagtctaag gccacttatg tgaacagcca agctactggt
1981 gaaagaagat tggcaaataa gatagaacat gagctatcaa gatgcagttt tcatccaatt
2041 cctactcgaa gcagtacatt agaaactaca aagagtcctc ttatcattga taaaaatgag
2101 cattttacag tttacagaga tcctgcactt attgggtcag aaacaggagc taatcatatt
2161 tcacctttcc taagccagca tccttttcct cttcactcct catctcatag aacctgttta
2221 aatccaggta cccatcatcc tgccttaact cctgcacccc atttactagc cggatcatct
2281 agtcaaactc cattacctac cattaacgct catcctctgc ctagtggtcc acaccatgct
2341 gttcatcacc ctcatttact tcccactgtg ttacctggag tgcctactgc ctccttactt
2401 ggtggccacc cacgactaga gagtgctcat gccagcagct tgagccactt agcgctagca
2461 caccagcaac aacaacagtt gttacagcac cagtcacctc atcttcttgg acaagcccat
2521 ccttctgctt catataatca gcttggactt tatccaatta tttggcagta tccaaatgga
2581 acacatgcat actcaggact tggtttgcct tcttctaagt gggttcaccc agaaaatgca
2641 gttaatgctg aagcttcatt aaggaggaat tctcccagtc cttggctaca tcagcccacc
2701 cctgtgacct cagcagatgg tattggatta cttagtcaca ttcctgtcag accttccagt
2761 gcagagcctc atcggcctct taaaattaca gcccattcca gtccaccatt gacaaaaact
2821 ttagtagatc atcataagga agaattagaa agaaaagctt ttatggaacc attacggtct
2881 gttgcatcca catcagccaa aaatgacctg gatctaaata ggtcacagac tggaaaagat
2941 tgtcacttac ataggcattt tgtggatcca gtattaaatc agttacagag gccaccccag
3001 gagactggag agaggttaaa caaatacaaa gaggaacacc gtcgaattct tcaagaaagt
3061 attgatgttg ctccctttac aactaaaatc aagggacttg agggtgagag agagaattat
3121 tccagagtgg catcatcatc ttccagtcct aaaagtcata tcatcaaaca agatatggat
3181 gtagaacgct cagtatcaga tctttataaa atgaagcact cagtgcctca gagtttaccc
3241 caaagtaact atttcactac attgtctaat agtgtggtca atgaaccacc aagatcatac
3301 ccatccaaag aagtttcaaa tatttacggt gataaacaga gtaatgccct tgcagcggca
3361 gcagctaatc ctcaaactct gacttcattt ataacatctc tttcaaagcc tccacctttg
3421 attaaacacc aaccagaaag tgaaggttta gtaggcaaga taccagaaca tcttccacat
3481 cagattgcat ctcactcagt aacaaccttc agaaatgatt gtaggagtcc tacccatttg
3541 acagtttctt ctacaaatac actccgcagt atgcctgcat tacatagagc accagtattt
3601 cacccaccaa tccatcacag cctggaaaga aaggaaggca gctatagtag tctttcccct
3661 ccaactttaa ctccggtgat gccagtaaat gctggtggta aagttcaaga atcacagaag
3721 cctccaactc taatacccga accaaaagac tcccaggcaa attttaagag ttcttcagaa
3781 cagagtttga cggagatgtg gagacctaat aataacctca gcaaagagaa aactgaatgg
3841 catgtggaga aaagcagcgg aaagttacag gctgctatgg catctgtcat tgtgcgtcca
3901 tcttctagta caaaaactga tagtatgcca gcaatgcagt tagcttctaa agatcgagtt
3961 agtgaaagat cttcagctgg ggcacataaa acagattgcc tcaaactagc agaagccgga
4021 gaaactggaa gaatcatttt gccaaatgtg aattcagaca gtgttcacac aaaatctgaa
4081 aaaaactttc aggctgtctc acagggcagt gttcccagtt cagtcatgtc tgctgtaaat
4141 acgatgtgta ataccaaaac ggatgtaatc acatctgctg ccgatactac cagtgtttcc
4201 agctggggtg gttcagaagt aatttcctct ttatcaaata ccattttggc ctctacatca
4261 tcagaatgtg tatcttcaaa aagtgtcagt cagccagtgg ctcaaaaaca agaatgcaag
4321 gtcagcacca cagcaccagt tacattagcc agtagtaaga caggaagtgt tgttcaaccc
4381 agttctgggt tctcaggcac aactgatttt atccatttaa aaaagcacaa ggcagcattg
4441 gctgcagctc agtataaaag tagtaatgcc agtgagactg aacctaatgc tataaaaaat
4501 cagacacttt cagcctccct tcctctggat agcactgtaa tctgtagtac aattaacaaa
4561 gcaaactctg taggaaatgg gcaagcttcc cagacaagtc aaccaaacta ccatactaaa
4621 ctgaaaaagg cctggctcac cagacactca gaagaagata aaaatactaa taaaatggaa
4681 aattcaggga attctgtatc agaaattatt aagccatgtt ctgtcaactt aatagcctct
4741 acatctagtg atatacaaaa tagtgtagat agtaagatca tagttgataa atatgtaaaa
4801 gatgataaag tcaacaggag aaaagccaaa agaacttatg aatctggctc tgaaagtgga
4861 gactcagatg aaagtgaaag caagtcagag caaaggacta aaagacaacc taagccaact
4921 tacaaaaaga agcaaaatga tttgcaaaag agaaaaggtg aaatagaaga agatttgaaa
4981 cccaatggag ttctcagcag gagtgccaaa gaaagaagta aactgaagtt gcaaagcaac
5041 agtaatagtt gtcatttagt aaacggagta gttagaatag atggtttctc ttctcctgac
5101 caatatgatg atgaagctat gagtttgtgg acacatgaaa attttgaaga tgatgaacta
5161 gatatagaga cttctaaata tatcttggat ataataggtg ataagttctg tcaattagta
5221 acatctgaaa aaacagcttt gccccgggtg aaaaaggatg ccaaaattgc ctggaaaaga
5281 gcagtgagag gagtccggga gatgtgtgat gcatgtgaag caacattgtt taacattcac
5341 tgggtctgcc aaaaatgtgg atttgtggtc tgcttagatt gttacaaggc aaaggaaagg
5401 aagagttcta gagataaaga actatatgct tggatgaagt gtgtgaaggg acagcctcat
5461 gatcacaaac atttaatgcc aacccaaatt atacctggtt ctgttttgac agatcttcta
5521 gatgccatgc acactcttag ggaaaaatat ggtattaaat cccattgtca ttgtactaac
5581 aaacagaatt tacaagttgg aaattttcct acaatgaatg gtgtatctca atctcagcag
5641 caaaatactc ctccgaagtc tgagaaaaat ggtggcagca gcccagagag tgatgtaggc
5701 acagataaca agttaactcc tccagaatcc cagtcaccac tgcactggtt agcagatctt
5761 gcagagcaaa aagccagaga ggaaaaaaaa gaaaacaaag aacttaccct tgaaaaccaa
5821 attaaagaag aaagagaaca agacaactct gaatctccaa atggcagaac atcacctctt
5881 gtgtcccaga ataatgaaca aggctcaacc ttacgggatt tgctgactac aacagctgga
5941 aagctacgtg tggggtctac agatgctggc attgcctttg ccccagtata ttcaatggga
6001 gccccaagta gcaaaagtgg acggactatg cctaacattc ttgatgacat aattgcttca
6061 gttgttgaaa acaaaattcc accaagtaaa acctccaaga taaatgtaaa accagagctt
6121 aaagaagagc ctgaagaaag cataatatct gcagtggatg aaaataataa attatacagt
6181 gatataccac attcttggat ctgtgagaag catattttat ggcttaagga ttataagaat
6241 agcagtaatt ggaagctttt caaagaatgt tggaaacaag gacagcctgc agtggtttct
6301 ggtgtgcata agaaaatgaa cattagccta tggaaggcgg aatcaattag tcttgatttt
6361 ggagaccacc aagctgatct cctgaactgc aaagatagca tcatttcaaa tgccaatgtt
6421 aaggaattct gggatggttt tgaagaagtt tcaaaacggc agaaaaacaa gagtggagaa
6481 acagttgttt taaaattgaa agactggcct tcaggagaag acttcaagac tatgatgcca
6541 gcaagatacg aagatctttt aaaaagtctg ccattgccag aatattgtaa tccagaagga
6601 aaattcaatt tggcctctca tttgccagga ttttttgtac gtcctgatct aggacccagg
6661 ttgtgcagtg cctatggtgt agttgctgct aaagatcatg atataggaac aacaaatctc
6721 catattgaag tttctgatgt tgtaaatata ctagtttatg ttggcatagc aaaaggaaat
6781 ggcattctct caaaagcagg aattctcaag aaatttgagg aagaagattt ggatgacatt
6841 ttaaggaaaa gattgaagga ctcaagtgaa atacctggtg ctctgtggca tatttatgct
6901 gggaaagatg ttgacaagat aagggaattt cttcaaaaga tttcaaaaga acaaggcctt
6961 gaagttctac cagaacatga tccaatacgt gaccaaagtt ggtatgtgaa caaaaagctc
7021 cgtcaaaggc tgcttgaaga atatggagtc agaacctgta ctcttattca gttccttggt
7081 gatgctattg ttttgccagc gggagcactt catcaggttc agaattttca cagctgtatt
7141 caggtaactg aagattttgt gtctccagaa catcttgtag agtcatttca tttaacacag
7201 gaactgagac ttttgaagga agaaatcaat tatgatgata aactacagtc aaagaaatgg
7261 tgagagcctt ggagatacac gaggatgaag tagaggatat ggaagaaaat taagtgtgat
7321 ccagtttgat atttttaggt tgttgaactg ggattactta accttgaatg atgatatgta
7381 tgcacactga ctttaagctt cataaaacca tcagtgccaa gaaattctct ttgtagtaat
7441 tacttgttac tgacaccaca gcagtatagc atatgtcaca gctcctgtga ttcaatgtta
7501 taaaacaagc agaattttaa aagcagcact atatagctgt tttgtattat agtgtatatg
7561 atgtttgtga aaatgccaga tttaaaatga tgtatttatt tttggtaaaa aataaaaaat
7621 tctatgctat attgttgatc aagtgtaaat gtgaccttgt acagtttact aaaattactg
7681 atatttttca ctacattgag acagttactg tgagaatagg acacaaacac cagctattgc
7741 ctgcatctgg gaaattgctg aatcgcacag cagtcatgtc ataatcagaa aattactgcc
7801 aaataattgt aaaatttgta aagtataaag tatataaagt agatactaaa tacagacact
7861 tcaatatttt gttgaagcta ttgactgtac aattaaacat tttcaaaagg tgtaatttat
7921 ttaaaattgt ctcattttgg taaaatttat gtgaactttt aaagctaaat attaaactta
7981 atatgctatg taaatataaa aaaaaaaaaa aaaaa
//