LOCUS BX537944 4263 bp mRNA linear HUM 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686B1186 (from clone DKFZp686B1186).
ACCESSION BX537944
VERSION BX537944.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4263)
AUTHORS Poustka A., Albert R., Moosmayer P., Schupp I., Wellenreuther R.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
JOURNAL Submitted (17-JUN-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by DKFZ (German Cancer Research Center,
Heidelberg/Germany) within the cDNA sequencing consortium of
the German Genome Project.
This clone (DKFZp686B1186) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..4263
/db_xref="H-InvDB:HIT000054728"
/organism="Homo sapiens"
/map="4q11"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686B1186"
/tissue_type="human retina"
/db_xref="taxon:9606"
CDS <1..949
/codon_start=2
/gene="DKFZp686B1186"
/product="hypothetical protein"
/note="hypothetical protein, N-terminus truncated"
/db_xref="GOA:Q92564"
/db_xref="H-InvDB:HIT000054728.17"
/db_xref="HGNC:HGNC:28998"
/db_xref="InterPro:IPR005176"
/db_xref="InterPro:IPR014764"
/db_xref="InterPro:IPR042460"
/db_xref="PDB:5V89"
/db_xref="UniProtKB/Swiss-Prot:Q92564"
/protein_id="CAD97912.1"
/translation="ELVGGPRGERGSLGGEPGVSCLKMHSDAAAVNFQLNSHLSTLAN
IHKIYHTLNKLNLTEDIGQDDHQTGSLRSCSSSDCFNKVMPPRKKRRPASGDDLSAKK
SRHDSMYRKYDSTRIKTEEEAFSSKRCLEWFYEYAGTDDVVGPEGMEKFCEDIGVEPE
NVVMLVLAWKLDAQNMGYFTLQEWLKGMTSLQCDTTEKLRNTLDYLRSFLNDSTNFKL
IYRYAFDFAREKDQRSLDINTAKCMLGLLLGKIWPLFPVFHQFLEQSKYKVINKDQWC
NVLEFSRTINLDLSNYDEDGAWPVLLDEFVEWYKDKQMS"
regulatory 4171..4176
/regulatory_class="polyA_signal_sequence"
polyA_site 4196
BASE COUNT 1356 a 705 c 800 g 1402 t
ORIGIN
1 ggagctggtg gggggaccgc gaggcgagcg cgggagcctg ggcggcgagc cgggtgtgag
61 ctgcctgaaa atgcactcgg atgccgccgc tgtcaatttt cagctgaact ctcatctctc
121 aacactggca aatattcata agatctacca cacccttaat aagctgaacc taacagaaga
181 cattggccaa gacgatcacc aaacaggaag tctgcggtct tgcagttctt cagactgctt
241 taataaagtg atgccaccaa ggaaaaagag aagacctgcc tctggagatg atttatctgc
301 caagaaaagt agacatgata gcatgtatag aaaatatgat tcgactagaa taaagactga
361 agaagaagcc ttttcaagta aaaggtgctt ggaatggttc tatgaatatg caggaactga
421 tgatgttgta ggccctgaag gcatggagaa attttgtgaa gacattggtg ttgaaccaga
481 aaacgtagtt atgcttgtcc tagcttggaa attggatgca caaaacatgg gttattttac
541 tctacaggag tggttaaaag gaatgacttc tctccaatgt gatacaacag aaaaactcag
601 aaatactttg gattacttaa gatcattctt aaatgattct acaaacttta aacttattta
661 cagatatgcg tttgactttg cacgggaaaa ggaccagcgc agcctagaca taaacactgc
721 caagtgcatg ttgggactgt tattaggaaa aatctggccc ctttttccag tttttcacca
781 attcttagag caatcaaaat acaaagttat taataaagac cagtggtgca atgtcctaga
841 gtttagcaga acaattaatc ttgacctcag caactatgat gaagatggag catggccagt
901 tttgttggac gagtttgtgg agtggtataa agacaaacag atgtcctagg actttatgca
961 tagcagcgag agagtcactg ttaccacagt tttgtcaccc attagccata aattgctgtt
1021 tgtatcaaag cgcatgctgc ttctcttgca ctgtctccct ttcgcaggga catgttggtg
1081 tttgctattg aattggccag ctctgcttgc tgtgtggcat tgttctcttg gaaggctgct
1141 ttgcagtttg tatttacact acagattggt gaatttgcca acgtcctcac tgtgattatg
1201 tgtatattgc tgtttaaatt ttgtatatgt gtataaaagg aaaaagcttc acctagagat
1261 tatttctgaa aaatgtattg taaaaataat tttgtggcat ttctagtccc tttttttgaa
1321 tgaaccaatt atactttatt tggtctccta tgtagcattt cagaaaacaa gagaaaactg
1381 ttaccatgaa caaacattgc cagaattaac cctactgttt aagaggccaa cttctggaag
1441 gaggtaggag tcataacttt ttagaggcat atgccaaata tcatttggta tacttaacaa
1501 tattagtgtt ttaaaatgat gagttataat tatttgaaca tatagatatg taacatgcca
1561 caaatcattt ctaccatgca aggtgtataa gttgtttatt ttttagtgtt aaaactataa
1621 tagcttgaat ataggtacca atgaacaaat tcaaattgca cctcttttct taaaagaatg
1681 ggatttaaac tcttataaac attctttaac ttttttgttt gtttgttctc tttttttcct
1741 tttgcattct tctagccagt gattgatctg ctaatgcttt ctttgccact ctaagtaaaa
1801 tttatttcac ctcctcaatg aaaacctcat ggttttgctg gctgtttata actgcatcgc
1861 acttctagtt gtggcttgaa ttttcagtta agctttcatg gtatgtaatt ttccagcctt
1921 ttgagaaaac aagcatacta taagtgagag ctgttttgtt ttccttgttt gtttgtttca
1981 tgctaggctt ttcctggcag catgtccatt gcaggcagtg gacaagaaac caccagcatt
2041 gagctaaccc agtacatgct aggacctgtc ctagaggggc cacttttcat tacctgagtt
2101 atttgtacag aagggcaata gccattattt ttgtggatga ggaaacaaga ataaacagaa
2161 tggtattttt aggtttgtat tttatgtctt tttttttttt tttttgccat tcttgaggaa
2221 atatagagat gacatgtttt caccccaact atctggtgct attgaatgac taattcagtc
2281 cctaaagttc tgtgaaaaca caaaagtcta atgatttgag tgagtaaatg gtaatggtgc
2341 atttgaacaa gtaaatgctg tcgtggtcag caagatccgt gatttgaaca tgtgatgact
2401 gaaaaaaggt ttgggttatt tggaactctg gctaaaactt ctttcgggtg acatgtgatc
2461 gtttaaatgg cattaagtga ataaagcaca cagacagtgc tactcttgac cactatttta
2521 ccatttcttt gcaaacagtg ttcacatttt catatttttt ccctaactaa accaccaaag
2581 aaagaaattt tgtatgtata tacagtgtgt gtgtatacaa aatcatgata tagtagaatg
2641 caactacttt ctttttctac caaacgaaag gttttatttg ctgtgaaata aaccagaagt
2701 ttaaaaaacc ctgtagtgat taagcatact taaccactcc ttatttgtag attcactttc
2761 aaccttaaaa attaatacca gtttgcataa accgatatct gaaaagaaca ggaaatgtta
2821 atggcaagca acagctatta atactgatgt gatggatgca tttgttttgc agtggtgact
2881 ggcctaggca ggtttggatc tgtgaagaat tgattcattt tcaaaattat tccataaagt
2941 taaaaagtta cacttcaaag gcaacaggtc atacagttct ttaaatctga tcaactgtag
3001 ctttatttaa agcaaatata aatcatagat gaagttattt taaacactat gttagaatat
3061 agagattttt aaaaaatgct gataagcaca gttaattcta aaatgagagg attgttacag
3121 gagggagatg ttacagttaa tccacaatca acattttgat ggtaggaaaa aaactgcgta
3181 aaaactattg cattatgtat gataagaaag taagtattcc aaagggataa tcttgcatat
3241 taagaaaact ccaaataatc tttaaactgc cttgaaaaat aaacctcttt gactgctgag
3301 cggcagagtg cttacccttg attgtcttga ttttatatat ttatttctaa ggggagaaaa
3361 aggggtcaga cagagtaata tgatacattt tcttaaaaac ttctctaagt tgcacaaaac
3421 tgaacaatca tcaagcactt atttactggc taatgttgaa taaattaggg tgccttcatc
3481 tgggttttct ttagtaccta agtctacaac cctttctctt tttctattgt gtttcgaact
3541 ccacattgca atactctgtt gtcatggaat acaaccttta gatgtttact gctgaagtag
3601 gtcagaaatt gtattatttg atttgcctca aacatccact gtaatgttac atgcaccttt
3661 tttgaagcat gaactctgaa ttatgttttt ataaatctga ctaggcaaac ctagattctg
3721 gtttcacaat ggatttattt tctctctcag tctccatttt aacagtgctt ttgaagttta
3781 tacagaaagc tttaaaagtt agtttgtgcc cttggttttt attcttaaaa ctgctaaaat
3841 acctctgtaa gccttatcct ttattctttc atatgttgta taataaatgt atagatttca
3901 ttgaccaact aaaatgttgg gtgtctgtaa atgagaccaa aacgtgggtt gcttttttca
3961 taaaataatt tctattgggg gttactgttc aatgacagca ggtaacctat aactgtgaat
4021 gcttcgtgtc gtcagtattt gcattacatt cataaaagtg tgcaagtcct gtgactccca
4081 gcttaactga aatactgtta tgccacctaa cttgagtaca gcaaactggt tttaggtttc
4141 aatgacattg atgtaaaatg atatcccatg aataaaaagt atttgtgttt ggtttcagaa
4201 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aagagaaaaa aaaaaaaaaa
4261 aaa
//