LOCUS BX537943 4450 bp mRNA linear HUM 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686O19118 (from clone DKFZp686O19118);
complete cds.
ACCESSION BX537943
VERSION BX537943.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4450)
AUTHORS Poustka A., Albert R., Moosmayer P., Schupp I., Wellenreuther R.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
JOURNAL Submitted (17-JUN-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by DKFZ (German Cancer Research Center,
Heidelberg/Germany) within the cDNA sequencing consortium of
the German Genome Project.
This clone (DKFZp686O19118) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..4450
/db_xref="H-InvDB:HIT000054727"
/organism="Homo sapiens"
/map="3q12.3"
/mol_type="mRNA"
/dev_stage="fetal"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686O19118"
/tissue_type="human fetal kidney"
/db_xref="taxon:9606"
CDS 105..2765
/codon_start=1
/gene="DKFZp686O19118"
/product="hypothetical protein"
/note="sentrin-specific protease 7, differentially
spliced"
/db_xref="GOA:Q9BQF6"
/db_xref="H-InvDB:HIT000054727.15"
/db_xref="HGNC:HGNC:30402"
/db_xref="InterPro:IPR003653"
/db_xref="InterPro:IPR038765"
/db_xref="PDB:3EAY"
/db_xref="UniProtKB/Swiss-Prot:Q9BQF6"
/protein_id="CAD97911.1"
/translation="MLNAKPEDVHVQSPLSKFRSSERWTLPLQWERSLRNKVISLDHK
NKKHIRGCPVTSKSSPERGSQRSKTVDDNSAKQTAHNKEKRRKDDGISLLISDTQPED
LNSGSRGCDHLEQESRNKDVKYSDSKVELTLISRKTKRRLRNNLPDSQYCTSLDKSTE
QTKKQEDDSTISTEFEKPSENYHQDPKLPEEITTKPTKSDFTKLSSLNSQELTLSNAT
KSASAGSTTETVENSNSIDIVGISSLVEKDENELNTIEKPILRGHNEGNQSLISAEPI
VVSSDEEGPVEHKSSEILKLQSKQDRETTNENESTSESALLELPLITCESVQMSSELC
PYNPVMENISSIMPSNEMDLQLDFIFTSVYIGKIKGASKGCVTITKKYIKIPFQVSLN
EISLLVDTTHLKRFGLWKSKDDNHSKRSHAILFFWVSSDYLQEIQTQLEHSVLSQQSK
SSEFIFLELHNPVSQREELKLKDIMTEISIISGELELSYPLSWVQAFPLFQNLSSKES
SFIHYYCVSTCSFPAGVAVAEEMKLKSVSQPSNTDAAKPTYTFLQKQSSGCYSLSITS
NPDEEWREVRHTGLVQKLIVYPPPPTKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYL
ILEKASDELVERSHIFSSFFYKCLTRKENNLTEDNPNLSMAQRRHKRVRTWTRHINIF
NKDYIFVPVNESSHWYLAVICFPWLEEAVYEDFPQTVSQQSQAQQSQNDNKTIDNDLR
TTSTLSLSAEDSQSTESNMSVPKKMCKRPCILILDSLKAASVQNTVQNLREYLEVEWE
VKLKTHRQFSKTNMVDLCPKVPKQDNSSDCGVYLLQYVESFFKDPIVNFELPIHLEKW
FPRHVIKTKREDIRELILKLHLQQQKGSSS"
regulatory 4412..4417
/regulatory_class="polyA_signal_sequence"
polyA_site 4431
BASE COUNT 1501 a 727 c 817 g 1405 t
ORIGIN
1 gggaggggtc ctgaggtgac agcgcctgca actgaaattt cagcagcggg agaagatgga
61 caagagaaag ctcgggcgac ggccatcttc atccgataag aaagatgtta aatgcaaaac
121 cagaggatgt ccatgttcaa tcaccactgt ccaaattcag aagctcagaa cgctggactc
181 tccctttgca gtgggaaaga agcctaagga ataaagtcat ctctctagac cataaaaata
241 aaaaacatat ccgagggtgt cctgttactt ccaagtcatc accagaaagg ggctcacaac
301 gaagtaagac agtagatgac aattctgcaa agcagactgc gcacaataaa gaaaaacgaa
361 gaaaggatga tggcatttct cttttaatat ctgatactca gcctgaagac cttaacagtg
421 gaagtagagg ttgtgatcat ctcgaacagg aaagcagaaa caaggatgtt aaatattctg
481 attcaaaagt ggaactcact ctgatttcca ggaagacaaa gagaaggctt agaaataatt
541 tacctgattc tcaatattgt acttctttgg ataagtcaac agaacagaca aaaaaacaag
601 aagatgactc aacaatatcc actgagtttg aaaagccaag tgaaaactat catcaggatc
661 caaaactgcc tgaagaaatt acaactaaac ctacaaaaag tgattttact aaactatcct
721 cacttaacag tcaggagttg actttgagta atgccaccaa aagtgcctct gccggttcaa
781 ccactgaaac tgttgagaac tctaattcca ttgatattgt ggggatttct tccctggttg
841 agaaggatga gaatgagttg aataccatag aaaagcctat tctaagagga cataatgaag
901 ggaaccaatc actgatctca gctgaaccaa ttgttgtttc cagtgatgaa gaaggacctg
961 ttgaacataa aagttcagaa attcttaagt tacaatctaa gcaagaccgt gagacaacta
1021 atgaaaatga gagtacttct gaatcagcat tgttagaact accattgatt acatgtgaat
1081 ctgtacagat gtcatctgag ttatgcccat ataatcctgt catggagaac atttccagta
1141 ttatgcctag taatgagatg gatctacaac tggattttat atttacttct gtttatattg
1201 gtaaaataaa aggagcttct aaaggttgtg ttacaatcac aaaaaaatat attaagatcc
1261 catttcaagt gtccctgaat gagatttcat tgctagtgga taccacacat ttaaagcggt
1321 ttgggttatg gaaaagtaag gatgataatc acagtaaaag gagtcatgct attcttttct
1381 tctgggtctc ttcagattat cttcaagaga ttcagaccca attagaacac tctgtattaa
1441 gccagcaatc aaaatctagt gaattcattt tccttgaact acacaatcct gtttcacaaa
1501 gagaagaatt gaagctgaaa gatattatga cggaaataag tataatcagt ggagaattag
1561 agctttctta cccgttgtct tgggttcagg catttccttt gtttcagaac ctctcttcaa
1621 aagaaagttc ttttattcat tattactgtg tttcaacttg ttctttccct gctggtgttg
1681 ctgttgctga agaaatgaag ctgaaatcag tatctcagcc ctcaaacaca gatgcggcca
1741 agcctactta caccttcctg cagaagcaaa gtagcggttg ctactccctt tctattacat
1801 ctaatccaga tgaagaatgg cgagaagtca ggcacactgg acttgttcag aagttgattg
1861 tatatcctcc accacctact aaggggggat taggagtaac taatgaagat ctggagtgtt
1921 tagaagaagg agagtttctt aatgatgtaa tcattgattt ttaccttaag tatcttatat
1981 tggagaaggc atcagatgaa cttgttgaac gaagtcacat ttttagtagc tttttctata
2041 aatgcttgac aagaaaggaa aataatttaa cagaagataa tccaaatctt tcaatggcac
2101 agagaagaca taaaagagta agaacatgga ctcgtcacat aaacattttt aataaagatt
2161 acatctttgt acctgtaaat gagtcgtctc actggtatct cgcagtcatt tgttttccat
2221 ggttagaaga agctgtgtat gaagattttc cacaaactgt atcccagcag tcccaggctc
2281 agcagtccca aaatgacaac aaaacaatag ataatgatct acgtactact tcgacactgt
2341 ctttgagtgc agaggattcc caaagtaccg agtcgaatat gtcagtacca aagaaaatgt
2401 gtaaaaggcc atgtattctt atactagact ccttgaaagc tgcttctgta caaaacacag
2461 ttcagaattt acgagagtat ttagaggtag agtgggaagt taaactaaaa actcatcgtc
2521 aattcagcaa aacaaacatg gtggatctat gccctaaagt tcctaaacag gacaatagca
2581 gtgattgtgg agtatattta ttgcagtatg tggaaagctt cttcaaggat cctattgtta
2641 actttgaact tccaattcat ttggagaagt ggtttcctcg tcatgtaata aagaccaaac
2701 gggaagatat tcgagagctc atcttgaaac ttcatttaca gcaacagaag ggcagcagta
2761 gctagttaat ctgtacaaac atgacacaga tgttctctaa gattactgga aagcctctta
2821 ccagcatttg tgttagccag ctcacagaga agaaaataac ttgcagtagt tttataataa
2881 gtcattggaa cattatttaa aatatgtagg acacattatt agaattgttg ggatctcata
2941 gatggaatgg gaatgggggt gatatagata aacttactag atataaatta aaattttata
3001 aatatttcat atttttctga gtaaatatga ttggattatg caacagcata tgtaatatgg
3061 gaatgttttg tagataataa aacttacatg atctgtactt ccacgtgact gggtgctgag
3121 gggagttaaa gcctccctgg tgccagcccc agtgcttgtc aaatttgctg acaggtcaca
3181 tcatattgta attctattct ttgcagctca agcatgcagt atgaatactg tgtatttttt
3241 aaaaaaataa tttagtatca aggcttcaga aaatgccatt tacggcatcc cttctgtatg
3301 taacaaaaag acattcataa tgttaggaag atgataaaaa ttcgctcttt taaagtgcag
3361 cttattattc tcaattgcta aatacgatta ctctgcttta tttttttttc atttcttttg
3421 atgtcatatg tgagtatctt ataatttagt tcatttgttc agggtaaaat ttgaaacaaa
3481 aaattttacc tgtgcaaaat agttttttaa aaattataca tgtagctcaa cttgaggtac
3541 tgctatataa atattcactc acattatcac ggaatttatg tatagtttct ctaatataga
3601 agataaaatt ggtgtcctca taactttaac aaagaaaacc ctcagtctta tttattaatg
3661 ggtagaatta aatatataat tttatagctc agtttaccca gtattcatct gcaaagccag
3721 attgctctca ttgcttttat atttttaaat tgtagctttt agagacctat gatcctcatg
3781 gaacttaatt ttttattgaa tattcaggta acagttctga attcatgtga taatggtggc
3841 attatatatg attaaacact tcagaacttt ctaatgttat caggagtatt ttgagggaga
3901 tatgattata ttgtattttc tcagataaga aaaatgtttt ttaacaatat tattttaatc
3961 tgttttaagc atctcttaga tttacattat aactacataa agcagtgaag caaaggcaaa
4021 ttaagataaa gctagaaagt ctgaacattt tatttcaaaa tcatatgaat cggggtcagt
4081 taagcctcag tattcttagc ttttgttgat tttggcacta tctttatatt attaaatata
4141 tttgttgttt ggatatttca tataaagatg gctataatta catatttcat tcccaatttg
4201 tgtgtgttgg ggggtacttt taaaggtgac tattgttttg tacatctaat tttgggaaag
4261 caagtctata agacatcttg tgatttctta atgtttttgt ttgtatgttt ttcaaagata
4321 tcactgtcct ttatcatgtt ttgaagattg tttaaaattc attttcctaa attaatgtgc
4381 aagtaatgtt ttgaggatat cagtgtttta tattaaacat atttccaatt caaaaaaaaa
4441 aaaaaaaaaa
//