LOCUS BX537924 4450 bp mRNA linear HUM 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686I06147 (from clone DKFZp686I06147).
ACCESSION BX537924
VERSION BX537924.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4450)
AUTHORS Koehrer K., Beyer A., Mewes H.W., Weil B., Amid C., Osanger A.,
Fobo G., Han M., Wiemann S.
JOURNAL Submitted (17-JUN-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by BMFZ (Biomedical Research Center at the
Heinrich-Heine-University, Duesseldorf/Germany) within the cDNA
sequencing consortium of the German Genome Project.
This clone (DKFZp686I06147) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..4450
/db_xref="H-InvDB:HIT000054708"
/organism="Homo sapiens"
/map="12p11.21"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686I06147"
/tissue_type="human colon endothel primary cell culture"
/db_xref="taxon:9606"
CDS <1..1784
/codon_start=3
/gene="DKFZp686I06147"
/product="hypothetical protein"
/note="hypothetical protein, N-terminus truncated"
/db_xref="GOA:Q6ZUT9"
/db_xref="H-InvDB:HIT000054708.13"
/db_xref="HGNC:HGNC:28338"
/db_xref="InterPro:IPR001024"
/db_xref="InterPro:IPR001194"
/db_xref="InterPro:IPR004012"
/db_xref="InterPro:IPR005112"
/db_xref="InterPro:IPR005113"
/db_xref="InterPro:IPR036392"
/db_xref="InterPro:IPR037213"
/db_xref="InterPro:IPR037516"
/db_xref="UniProtKB/Swiss-Prot:Q6ZUT9"
/protein_id="CAD97905.1"
/translation="RRKERLRQHSEHVGLDNDLREKYMQEARSLGKNLRQPKLSDLSP
AVIAQTNCKFVEGLLKECRMKTKRMLVEKMGHEAVELGHGEANITGLEENTLIASLCD
LLERIWSHGLQVKQGKSALWSHLIQFQDREEKQEHLAESPVALGPERRKSDSGVMLPT
LRVSLIQDMRHIQNMSEIKTDVGRARAWIRLSLEKKLLSQHLKQLLSNQPLTKKLYKR
YAFLRCEEEREQFLYHLLSLNAVDYFCFTSVFTTIMIPYRSVIIPIKKLSNAIITSNP
WICVSGELGDTGVMQIPKNLLEMTFECQNLGKLTTVQIGHDNSGLLAKWLVDCVMVRN
EITGHTYRFPCGRWLGKGIDDGSLERILIGELMTSASDEDLVKQCRTPPQQKSPTTAR
RLSITSLTGKNNKPNAGQIQEGIGEAVNNIVKHFHKPEKERGSLTVLLCGENGLVAAL
EQVFHHGFKSARIFHKNVFIWDFIEKVVAYFETTDQILDNEDDVLIQKSSCKTFCHYV
NAINTAPRNIGKDGKFQILVCLGTRDRLLPQWIPLLAECPAITRMYEESALLRDRMTV
NSLIRILQTIQDFTIVLEGSLIKGVDV"
polyA_site 4428
BASE COUNT 1327 a 907 c 1037 g 1179 t
ORIGIN
1 agcgcaggaa agaacgcctt cgccagcatt ctgagcatgt tgggctggac aacgacttga
61 gggagaaata tatgcaagag gcacgaagtt taggaaaaaa cctgaggcaa cccaaactgt
121 cagacctctc tcctgcagtt attgcacaga ccaactgtaa attcgtagaa ggcttattaa
181 aagaatgtag aatgaagaca aagcgcatgt tggtggagaa gatgggacat gaagcggtgg
241 aacttggcca tggagaagca aacatcaccg gcctggagga gaacaccttg atcgccagcc
301 tttgtgacct gctggagagg atatggagcc atggcttgca ggtcaagcag gggaagtcgg
361 ctttgtggtc acatttaatt caatttcagg acagagaaga gaaacaagag caccttgcag
421 aatcaccagt tgccctcgga ccagaaagaa gaaaatctga ctcaggagtt atgttgccaa
481 cgctcagggt ctctcttatt caggacatga ggcatattca aaacatgagt gagatcaaga
541 ctgatgttgg acgagctcgg gcgtggataa gactgtctct agaaaagaag ctcttgtccc
601 agcatcttaa gcagttgctt tctaaccaac cactcaccaa gaagctttat aagcgatatg
661 cttttctacg ttgcgaagaa gaaagagagc agtttcttta ccaccttctt tctctcaatg
721 ctgtggacta tttctgcttc accagtgtgt tcaccactat catgattccg tataggtcag
781 tgatcatccc aatcaaaaag ctgagcaatg caataatcac atcaaaccct tggatctgtg
841 tatcaggaga gctgggagac acaggagtaa tgcagattcc caaaaacctc ctcgaaatga
901 cctttgagtg ccagaacttg gggaagctga ccactgttca gattggtcac gataactcag
961 gactgttagc caaatggcta gtggattgtg tcatggtcag aaatgaaatc acaggacata
1021 catacagatt cccatgtggg cggtggctgg ggaaaggcat tgatgatggg agcctggaga
1081 gaattcttat tggagagttg atgacatcag catcagatga agatctagta aagcagtgtc
1141 ggactccacc ccagcagaag tcacccacca cggctaggag attgagcatc acttcactga
1201 caggaaaaaa caacaaaccc aatgctgggc agatacaaga aggaattgga gaagctgtga
1261 acaatattgt gaaacatttt cataaacctg aaaaagagag aggaagcctc accgtgttgc
1321 tgtgtggaga aaatggcctg gttgcagccc ttgagcaagt tttccaccat gggttcaaat
1381 ctgcccgcat ctttcacaag aatgtcttca tctgggactt catagagaaa gtggttgctt
1441 attttgaaac aactgaccag attctagata atgaagatga tgtccttatt cagaaatcat
1501 cctgcaaaac cttctgccac tacgtaaatg ctattaatac tgcacccagg aacattggga
1561 aggatggcaa attccagatt ttagtttgcc ttggaacaag ggatcgcctg ctcccacagt
1621 ggattccatt gttagctgag tgtcctgcca tcactcgaat gtatgaagag agcgctctcc
1681 tgcgagaccg catgactgtc aactccctta tccgaattct gcagaccatt caggacttca
1741 ccatagtcct agaaggatca ctcatcaaag gagtggatgt gtaacccaac tggctagaaa
1801 ctctcagtcc aaaccttgct ccttccccaa ctaggggacc gatttggact tgtctgacag
1861 tagtgagtca ctgcaggggc agccaaacat atgccccatt tggaacaatc ctcactctac
1921 agacaaggca aaatgttgta ttgtagttca tttgaacctg gaatttagta taaaatagag
1981 tattttcatg tgttagatgt gtgtaaatat gctatcttct ttaagaaatt atattactct
2041 aataagatgc ttttcttaga ttgaatattc ctgtgactta aaataagtag cttaaaaatg
2101 ttgggggttg gggggaagag tggtgctagc caggaagaag ccagtaaaca tgtaaatata
2161 gtgcaaccca gtcgggcttt tttttttctc caggtatcac aaagaaaccc agaatgcatt
2221 gttatgtagt agccatccat cttggagtct gatcctttgt attgtggatg cacacagctt
2281 tacctactgt actggtagtc ttcacttcta tcttttaagt tacaaactgt tttatatatt
2341 tgaatcgcta gtcacttttc cagtcttttg gaaaaaaatt tcagtccgca caagatgata
2401 taattggagt attttaaaca ctagacccca ggagcttggc tgaactggaa agagaacata
2461 caaagctctg agaaatgtgt tcaattgtgg gattataact tctttacact tcggaaagat
2521 tagcctagac taacttcatt cttggcattt ttattcttgt tatttgaggt actttgggaa
2581 gatgtgaatt tcagtgttag attcatagtg ataagaactg caaacagcaa tttgattctg
2641 tacttttaat ttggccatct aaactgtgca gtggtctacc tcttaaggat aaccatgagc
2701 cctgtctttg ttagggtcta atcacccacc tctccagggc ccatcccccc tcgggaaatg
2761 gaaggaatgt ctaaggagga ggagggctgt gtgtggcctg gaatgttttt gtgaaagcat
2821 ttgttgacca tgataatgca aataacagaa ggagagagag aatgaaccct ttctgggtgt
2881 ttcagggcaa gctttacgtt cctttgtagg aaggggagta ataatgtaaa acaactgacc
2941 cagagaagct aaaagccact ggcagcacag gctgacaaaa tggaagcaaa gcaagaggtg
3001 gcaacaattt tgaaagaaca aaagttgtga gtaactttcc agtttgatag tttataaaga
3061 agttaagtaa atgtagtatt ggctagttac tgtaagtcct catcttctgg taggtcctgt
3121 aactctaatt aggcatttgt acatttttag cagcaaaatt gcctcagcag agctcccagt
3181 tttattccca gttgtggctg aaaagcaaag ccatggcatc agtatccttg tgcaatcgga
3241 ggttgctggg ctttcaccac ctgtgttgtt aaccttattt cctggaggaa gaaacagatg
3301 aaacaagtgc ctaactccct ttatcaaaca cagccaagga cagcctcttt taacatgtga
3361 cttcatactt gaggaaaagg agagttgaca gctgtattta aaaacccatg gagccgggtg
3421 cggtggctca cgcctatgat cccagcactt tgggaggccg aggcaggcgg atcacgaggt
3481 caggagattg agaccctcct ggctaacacc gtgaaacccc gtctctacta aaaatacaaa
3541 aaattagccg ggcgtggtgg cgggtgcctg tacaggaggc tgaggcagga gaatggcgtg
3601 aacccgcgag gcggagcttg cagtaagctg agatcgcgcc actgccctcc agcctgggca
3661 acagagcaag actccatctc aaaaaataaa tagataaaaa taaaaaccca tggaaatggt
3721 ttaagaaaat ggttctgggt acaccagaaa tttgtttgcc tgaagctaaa gtgtgtctac
3781 aatggtacag ctcttccagg gacatgggaa gtttatcgtg ggagatatcc agaacctgtt
3841 ttacactggg ctcctactgt gtttggtgat cagaaactat agaggggtcc aacccaggat
3901 ttcatgtttg tatcttcata aggccatgct cctgacaggt ctaggcaacc tgggggatga
3961 cttaggttag tgtgctagga ttgacacacc tcatccagcc ttcttacttt gtggatggga
4021 acacttaagg aatagagaga ttaaatctta cacttacccc acagctggtt actgacaaca
4081 caagctctag aattcatgtt tgtttgtttg ttttatttca ccaggctgca tgagactgac
4141 cttccggcat tcttactaat agtctttcta ttatactatt ggatctttat tcatccacct
4201 atacaagtag gaaataagga tgaatattca tttagaagaa ttaatattca tattaacaca
4261 ttgctctcag attattggga attaacatct tgtaaaaact gggagcaggc caggtacggt
4321 ggctaacgcc tgtaatcctg acactttggg agtctgaggc gggtggttca tctgaggtca
4381 gtcaggagtt caagaccaga ctggccaaca tggtgaaacc ccgtctctac taaaaaaaaa
4441 aaaaaaaaaa
//