LOCUS BX537923 4218 bp mRNA linear HUM 17-JUN-2003
DEFINITION Homo sapiens mRNA; cDNA DKFZp686I19147 (from clone DKFZp686I19147).
ACCESSION BX537923
VERSION BX537923.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4218)
AUTHORS Koehrer K., Beyer A., Mewes H.W., Weil B., Amid C., Osanger A.,
Fobo G., Han M., Wiemann S.
JOURNAL Submitted (17-JUN-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by BMFZ (Biomedical Research Center at the
Heinrich-Heine-University, Duesseldorf/Germany) within the cDNA
sequencing consortium of the German Genome Project.
This clone (DKFZp686I19147) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..4218
/db_xref="H-InvDB:HIT000054707"
/organism="Homo sapiens"
/chromosome="14q32.33"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686I19147"
/tissue_type="human colon endothel primary cell culture"
/db_xref="taxon:9606"
CDS <1..3390
/codon_start=1
/gene="DKFZp686I19147"
/product="hypothetical protein"
/note="hypothetical protein, N-terminus truncated"
/db_xref="GOA:Q8IVF2"
/db_xref="H-InvDB:HIT000054707.14"
/db_xref="HGNC:HGNC:20125"
/db_xref="InterPro:IPR001478"
/db_xref="InterPro:IPR036034"
/db_xref="PDB:4CN0"
/db_xref="UniProtKB/Swiss-Prot:Q8IVF2"
/protein_id="CAD97904.1"
/translation="IVESVVHEGDLHDPSRDGNLGLAVGEVGMDSKFKKLHFKVPKVS
FSSTKTPKDSLVPGAKSSIGLSTIPLSSSECSSFELQQVSACSEPSMQMPKVGFAGFP
SSRLDLTGPHFESSILSPCEDVTLTKYQVTVPRAALAPELALEIPSGSQADIPLPKTE
CSTDLQPPEGVPTSQAESHSGPLNSMIPVSLGQVSFPKFYKPKFVFSVPQMAVPEGDL
HAAVGAPVMSPLSPGERVQCPLPSTQLPSPGTCVSQGPEELVASLQTSVVAPGEAPSE
DADHEGKGSPLKMPKIKLPSFRWSPKKETGPKVDPECSVEDSKLSLVLDKDEVAPQSA
IHMDLPPERDGEKGRSTKPGFAMPKLALPKMKASKSGVSLPQRDVDPSLSSATAGGSF
QDTEKASSDGGRGGLGATASATGSEGVNLHRPQVHIPSLGFAKPDLRSSKAKVEVSQP
EADLPLPKHDLSTEGDSRGCGLEDVPVSQPCGEGIAPTPEDPLQPSCRKPDAEVLTVE
SPEEEAMTKDSQESWFKMPKFRMPSLRRSFRDRGGAGKLEVAQTQAPAATGGEAAAKV
KEFLVSGSNVEAAMSLQLPEADAEVTASESKSSTDILRCDLDSTGLKLHLSTAGMTGD
ELSTSEVRIHPSKGPLPFQMPGMRLPETQVLPGEIDETPLSKPGHDLASMEDKTEKWS
SQPEGPLKLKASSTDMPSQISVVNVDQLWEDSVLTVKFPKLMVPRFSFAAPSSEDDVF
IPTVREVQCPEANIDTALCKESPGLWGASILKAGAGVPGEQPVDLNLPLEAPPISKVR
VHIQGAQVESQEVTIHSIVTPEFVDLSVPRTFSTQIVRESEIPTSEIQTPSYGFSLLK
VKIPEPHTQARVYTTMTQHSRTQEGTEEAPIQATPGVGSISGDLQPDTGEPFEMVSSS
VNVLGQQTLTFEVPSGHQLADSCSDEEPAEILEFPPDDSQEATTPLADEGRAPKDKPE
SKKSGLLWFWLPNIGFSSSVDETGVDSKNDVQRSAPIQTQPEARPEAELPKKQEKAGW
FRFPKLGFSSSPTKKSKSTEDGAELEEQKLQEETITFFDARESFSPEEKEEGELIGPV
GTGLDSRVMVTSAARTELILPEQDRKADDESKGSGLGPNEG"
regulatory 4178..4183
/regulatory_class="polyA_signal_sequence"
polyA_site 4199
BASE COUNT 1133 a 1066 c 1053 g 966 t
ORIGIN
1 attgtggaat ctgttgttca tgaaggtgat cttcatgatc catctcgcga tggtaacttg
61 gggcttgctg ttggagaagt tggaatggat tcgaagttta agaaactgca ttttaaagtg
121 cccaaagttt cattttcttc taccaaaact cctaaagata gtttagtccc aggtgcaaag
181 tctagcatag gtctttccac gattccttta tcatcttcag aatgctcaag ttttgaatta
241 caacaggttt cggcttgttc agagccatcc atgcagatgc ctaaggtggg ttttgctggg
301 tttccatcat cccggcttga tctcactggt cctcactttg aatcttctat tctctctccc
361 tgtgaggatg ttacacttac aaaataccag gtgactgttc ccagagctgc cttggcccct
421 gagcttgctc tggaaattcc ttctgggtct caggctgata ttcctcttcc caagacagag
481 tgctccactg acctgcagcc tccagaggga gttccaacat ctcaagctga gagtcactct
541 ggcccactga attccatgat tcctgtttct cttggtcagg tgtcttttcc taaattctat
601 aaaccaaagt ttgtgttttc agtcccccaa atggcagttc ctgagggaga cctacatgca
661 gcagtgggtg ccccagtcat gtctcctctt agccctggag aaagagtgca gtgccccttg
721 ccaagcaccc agctgccatc cccaggcacc tgtgtgtccc agggcccaga agagcttgtg
781 gcctccttgc agacatcagt agtggcccct ggagaagccc cttctgaaga tgctgaccac
841 gaagggaaag ggagtccctt gaaaatgcct aagattaagc ttccatcatt taggtggtcc
901 ccgaagaagg aaacagggcc aaaggtggac ccagaatgca gcgtggagga ctcaaaactc
961 agcctggttt tagacaagga tgaagtggcc ccgcagtctg ccatccacat ggatctgcct
1021 cctgagaggg atggagagaa ggggaggagc acaaagcctg gctttgccat gccaaaactt
1081 gcacttccca aaatgaaggc ttctaagagt ggggtcagcc tgccacagag agacgtggat
1141 ccttcccttt ctagtgccac agcagggggt agctttcaag acacagaaaa ggccagcagt
1201 gacggtggta ggggaggact tggtgcaaca gcaagtgcca caggaagtga gggtgtgaac
1261 ctccaccggc cacaggtcca cattcccagt ttgggctttg ccaaacctga tctcagatcc
1321 tccaaggcca aggtggaggt gagccagcct gaagctgacc tgcctcttcc caaacatgat
1381 ctgtctaccg aaggtgacag cagaggatgt gggctcgagg atgtcccagt gagccagcct
1441 tgtggggagg ggatagcccc cacacctgaa gatcccctcc agccatcctg tagaaaacca
1501 gatgctgaag tcctcacagt ggaaagccca gaggaggaag ccatgaccaa ggactcgcag
1561 gaaagctggt ttaaaatgcc caagttccgc atgcccagcc ttaggcgctc tttcagggac
1621 agaggcgggg ctggaaagct ggaagtggct cagacacagg caccggcagc aacagggggt
1681 gaagcagcag ctaaagtcaa agagttcctt gtttctgggt caaacgtgga ggcagctatg
1741 tccctacagc tcccagaggc agatgcagaa gtgacagctt ctgagagcaa atcatccaca
1801 gatattctaa ggtgtgatct tgacagcaca ggcttgaagc tgcacctttc cactgctggg
1861 atgactgggg atgagctttc cacttctgag gtcaggatcc atccatccaa aggacctctc
1921 ccttttcaga tgcctggcat gaggcttcca gaaacccagg ttcttccagg agaaatagat
1981 gagactcctc tttccaagcc aggacatgac cttgccagca tggaggataa aacagagaaa
2041 tggtcttccc agcctgaagg tccacttaaa ttgaaagctt caagtactga tatgccatcc
2101 cagatttctg tggttaatgt ggatcaactg tgggaagatt ctgtcctaac tgtcaaattc
2161 cccaaattaa tggtaccaag gttctccttc gctgccccca gctcagagga tgatgtgttc
2221 atccccactg tgagggaagt gcagtgtcca gaggccaata ttgatacagc cctttgtaag
2281 gaaagtccgg ggctctgggg agccagcatc ctgaaggcag gtgctggggt ccctggggag
2341 cagcctgtgg accttaacct gcctttggaa gctcccccaa tttcaaaggt cagagtgcat
2401 attcagggtg ctcaggttga aagtcaagag gtcactatac acagcatagt gacaccagag
2461 tttgtagatc tctcagtacc caggactttt tccactcaga ttgtgcggga atcagagatc
2521 cccacgtcag agattcaaac accttcgtac ggattttcct tattaaaagt gaaaatccca
2581 gagccccaca cgcaggctag agtgtacaca acaatgactc aacactctag gactcaggag
2641 ggcacagaag aggctcccat acaagccacc ccaggagtag gctccatttc tggagatctc
2701 cagcctgaca ctggagaacc atttgagatg gtctcttcca gcgtcaatgt actgggacag
2761 caaacactca catttgaagt tccttctggc caccagcttg cagacagctg ttcagatgag
2821 gagccagcag aaattcttga gtttccccct gatgatagcc aagaggcaac cacaccactg
2881 gcagatgaag gcagggctcc aaaagacaaa ccagaaagta aaaaatctgg tctgctctgg
2941 ttttggcttc caaacattgg gttttcctct tctgttgatg agacaggtgt tgattccaaa
3001 aatgacgtcc agagatctgc tcccattcaa acacagcctg aggcacgacc agaggcagaa
3061 ctgcctaaaa aacaggagaa ggcaggctgg ttccgatttc ccaaattagg gttctcctca
3121 tctcctacca agaaaagcaa aagcaccgaa gatggggcag agctggaaga acaaaaactt
3181 caagaagaaa caatcacgtt ttttgatgcc cgagaaagtt tctcccctga agagaaggaa
3241 gagggtgaac tgatcgggcc tgtgggcact gggctggact ccagagtgat ggtgacatcc
3301 gcggcaagaa cagagttaat cctgcccgag caggacagaa aagctgacga tgaaagcaaa
3361 gggtcaggcc tgggaccaaa tgaaggctga gaggtatggc tcatcggtac aagagagatg
3421 caaaaaacta agttggaaag taaaggctac acacacatat ggagcacccc atcccacagc
3481 acattacatc cacctcactt cacagaacgg agaacagagc agaaatgacc agaacacctt
3541 tgtcaccatc acacagccct cctaaaatgg aaccaaagct tcccagctcc ctcaaagctt
3601 tggatgcaaa gaaggcaccc tgacttccac aagacaccag aattcacacg gtactcagag
3661 gcactgctgg ggaagtttgt tggtctttat tagataaatt tccagagacc tgtccataat
3721 acccaacaga acatgactgt ttctttgagg aaagggttat aatgtctgtg gtgtacaagt
3781 cgtttttggt ataacttctt tcctgctgct gctgcttccc ggcaaacata gttttcctat
3841 ttcaggcaga gtgcggtata ttccaggaaa cactgtttcc tactcactta gcttacttct
3901 ttgttgaatg cctcactaat ggcaagtttc aagatgtttt gggtgacaat gcacacatgc
3961 tgggcaaaag ggtgatggcc agtggctggc agctgggcca gcagaagcta ggacatctgt
4021 gagttgtcat tctcatctat ccatgtccac tggcctgcca gcatccgcca gtgccttgcc
4081 agtgtgcacg gtcccacact gtggcccctg agtcccctaa tgtacacgct gcagccagaa
4141 tgcagatgga gctggcttgg ctgttccctg gatgggcaat aaagaaagtg ctgcatccca
4201 aaaaaaaaaa aaaaaaaa
//