LOCUS BX537919 4313 bp mRNA linear HUM 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686L18142 (from clone DKFZp686L18142).
ACCESSION BX537919
VERSION BX537919.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4313)
AUTHORS Koehrer K., Beyer A., Mewes H.W., Weil B., Amid C., Osanger A.,
Fobo G., Han M., Wiemann S.
JOURNAL Submitted (17-JUN-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by BMFZ (Biomedical Research Center at the
Heinrich-Heine-University, Duesseldorf/Germany) within the cDNA
sequencing consortium of the German Genome Project.
This clone (DKFZp686L18142) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..4313
/db_xref="H-InvDB:HIT000054703"
/organism="Homo sapiens"
/map="4q21.22"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686L18142"
/tissue_type="human colon endothel primary cell culture"
/db_xref="taxon:9606"
CDS <1..1867
/codon_start=2
/gene="DKFZp686L18142"
/product="hypothetical protein"
/note="hypothetical protein"
/db_xref="H-InvDB:HIT000054703.13"
/db_xref="InterPro:IPR005172"
/db_xref="InterPro:IPR028307"
/db_xref="InterPro:IPR033467"
/db_xref="UniProtKB/TrEMBL:Q7Z3G2"
/protein_id="CAD97902.1"
/translation="FRNTIPAPDIPEAAATATSPPRLPSRSPGTLERSSLDKLGKEAA
GQSYRARAKQAPPGLGIAQDLLEPLPRSPREEKAAAAGVPDQLSSGRTIMEVVPAEIA
KKPRTPTSGPVITKLIFAKPINSKAVTGQTTQVSPPVIAGRVLSQSTPGTPSKTITIS
ESGVIGSTLNSTTQTPNKIAISPLKSPNKAVKSTVQTITVGGVSTSQFKTIIPLATAP
NVQQIQVPGSKFHYVRLVTATSASSSTQPVSQNPSTNTQPLQQAKPVVVNTTPVRMSV
PIVSAQAVKQVVPKPINPTSQIVTTSQPQQRLIMPATPLPQIQPNLTNLPPGTVLAPA
PGTGNVGYAVLPAQYVTQLQQSSYVSIASNSTFTGTSGIQTQARLPFNGIIPSESASR
PRKPCNCTKSLCLKLYCDCFANGEFCNNCNCTNCYNNLEHENERQKAIKACLDRNPEA
FKPKIGKGKEGESDRRHSKGCNCKRSGCLKNYCECYEAKIMCSSICKCIGCKNFEESP
ERKTLMHLADAAEVRVQQQTAAKTKLSSQISDLLTRPTPALNSGGGKLPFTFVTKEVA
EATCNCLLAQAEQADKKGKSKAAAERMILEEFGRCLMSVINSAGKAKSDPCAMNC"
regulatory 4221..4226
/regulatory_class="polyA_signal_sequence"
polyA_site 4243
BASE COUNT 1423 a 814 c 844 g 1232 t
ORIGIN
1 ctttcgaaat acaatcccgg cccctgacat accagaggcg gcggcgacgg cgacgtcgcc
61 accccggctc ccttctcggt ccccgggtac cctggagcgc tccagtttgg acaaactggg
121 aaaggaagct gctggccaga gctatcgtgc acgggcaaaa caagccccgc cggggctcgg
181 gattgcccag gaccttctgg agcccctacc tcggagcccg agggaggaga aagcggcagc
241 cgctggagtg cctgatcaac tttctagcgg gagaacgatc atggaggtgg tgccagctga
301 gattgctaag aagcctcgaa cgccaacctc tggtccagta atcacgaagc tgatctttgc
361 aaaaccaatt aatagtaaag cagttacagg acagacaact caagtttcac caccagtcat
421 cgcaggtagg gttctttcac agtctactcc cggaactcca tcaaagacca taacaatatc
481 tgaaagtggt gttattggat caactttaaa ttctacaaca cagacaccaa ataaaatagc
541 catctcacct ttgaaatcgc caaataaggc agtgaaatca actgtgcaga ccatcactgt
601 tggaggagtg agcacatcac agtttaagac aattattcct ctggcaactg ctcccaatgt
661 ccagcagatt caagtgcctg gaagcaagtt tcattatgtc cgacttgtta ctgccacatc
721 agccagtagc tcaacccagc cagttagtca gaatcccagt acaaacactc agcctcttca
781 gcaagcaaag ccagtggttg ttaatacaac cccagtgcgg atgtcagttc caattgtctc
841 agctcaggct gtcaaacaag ttgttccaaa accaatcaat ccaacttcac aaatagtaac
901 tactagccag ccacagcaac ggcttatcat gcctgccaca ccactgccac agatccagcc
961 caacctcact aacctgccac caggcactgt cctggcacca gctccgggaa cagggaatgt
1021 gggttatgca gtgcttccag ctcagtatgt tactcagcta cagcagtctt catatgtatc
1081 aatagcaagc aactctacct ttactggaac atctggtatc cagacccagg cacggcttcc
1141 attcaatggc ataatcccat cagagtcggc cagtcggccc cgaaagccct gtaattgtac
1201 aaaatcactg tgtttgaaat tgtattgtga ttgctttgca aatggtgaat tttgcaacaa
1261 ctgcaattgt actaattgtt acaacaattt ggaacatgaa aatgaaaggc aaaaagcaat
1321 aaaggcatgc cttgacagaa atccagaagc ctttaagcct aagataggga aaggaaagga
1381 gggagaatct gatcgacgtc atagcaaagg gtgtaattgc aaacgatcag gatgtcttaa
1441 aaactactgt gaatgctatg aggcaaaaat aatgtgttcc tcaatatgca aatgtattgg
1501 ctgtaagaat tttgaagaaa gcccggaaag gaagacattg atgcatttgg cagatgcagc
1561 tgaagtaagg gtacagcaac aaacagcagc caagacgaag ttatcctctc aaatttcaga
1621 cttgcttact aggccaacac cagctttaaa tagtggaggc ggaaaattgc catttacatt
1681 tgtaactaag gaagtagctg aagccacatg taattgcctc cttgcccagg cagagcaggc
1741 agacaagaag ggaaaatcaa aggcagcagc ggaacggatg atacttgagg aattcggacg
1801 atgtttgatg agtgtcatca actctgcagg aaaggcaaaa agtgaccctt gtgccatgaa
1861 ttgctaactc ttgcacaaaa gactgataaa tggaactgta cagaaaattt aaggtgcagg
1921 gacacttgat tttctggaag aaaaacaatt actgtatttt aattcagtcc ttgttttaaa
1981 agacctgaaa ttataatact gaaggagaag aaattttaaa tgaggaaatt agtacatttt
2041 aaatcttagt taaatctgct tatgtccctt ctaaattgaa tttttcttta ttatatagat
2101 tttttaattt gcttgggttt cttaagaatt agatgttctc tttctgatac ctttgacaaa
2161 aatgtttata aattcatata atttataatg tatggtgttg tatgactttg ttaatagaaa
2221 agccaaagca gcagtggtta gcacccattc tttgggactt gatctagaat atctgcagac
2281 agaatgttac ataaacaaat tcttatgaaa cacattcaaa tgacattttg tatttagaaa
2341 aggactatct tttaaagaaa aagcagcctt ttagggccga ttctggaata atatcctgtt
2401 gtcactttgg gaatgtcaga aggggaaaca atccccaggc tcactaaaaa ttttttaaag
2461 ttatttaaaa aaacatataa aatattaaag gacagtaaat ctcagaggat gggcaatgtg
2521 tttctataat aaggaaaggc taacagatgc tctgggctgt ctccattttc tttcaaagag
2581 gtggtatgta tttgaagtaa taaattgtca aagtgattac tgggtactat taaaatgata
2641 ggtggatata aatggaagta aacattatgt agtgataata tagaacctca catagtaatc
2701 aagtataaaa tttggcatgg gtggagaaac aaggaatagg gaagctgcaa aagatgaatt
2761 tagagaagtt ttcatctata caatcaatta tttttacaga tttttttttt tttttgagac
2821 ggagtctcgc tgtgtagccc aggctggagt gcaatggtga gatctcagct cactgcaacg
2881 cctctgcctc ccaggttcaa gcgattctcc tgcctcagcc tcccgtgtag ctgggactac
2941 aggtgcatgc caccatgccc ggctcatttt ttgtattttt agtagagacg gggtttcacc
3001 gtgttagcca ggatggtctc gatctcctga cctcgtgatt cgcccgcctc ggcctcccaa
3061 agtgctggga ttacaggcat aagccgccgt gccaggccct ttttatagac ttttgaacta
3121 agaggtttca aaccaaatcg caactcttac ttgatttaca gaaatgggcc tcctaacaaa
3181 attttcaaaa ttgtggtggg atttcttttt ataagggaag tttaatatgg cattattttc
3241 agccagtgat ttggaaggtc tgttttccta taattactaa aataacctaa atcattttca
3301 gtattcaaaa actctatgaa tttaagagcc tgttgtgaca ggactcttga ttttatgaca
3361 agaaaaaacc atgttggaat tcaggcattt tgttaggtac cttaatcatc agtaattagt
3421 atatgattat ttcatttcct acaaggactc tatagttgta tgtattaagt gtgtatatat
3481 gttcatatga acatgcaaga tataggcaat agaaattaag taatccaaaa gaggattccg
3541 ttattcacta aagtatcttc cttttaaatt tggatttata aaatcatagt gcagtaactt
3601 taaatgtaga tagttcaaac attctcagca cctcaatcta gtatgtttaa ttaaaatttg
3661 tataaatgta aattagtgta agagggtaaa ataataatca agttattttt caaaagattg
3721 caataagttt ttggtctaaa cttaaacttt gttcattttg tacatactct gtgttaattc
3781 taattgcacc tttgtgatgt gtatttatat acagtgtgca gaaaatgttc gtgaaatttt
3841 gattacaatt gtagattatg tatgatggca ttgcttacga atgttttgct tgtaaaaaaa
3901 tttcaaggtg caatcaaatg ctactagttt ttctgatttt caaaaatcta tctatctaaa
3961 atattaagcc ttttccttcc tgtgtagtac ttactaaata actttttgta ttcaggcatt
4021 tgcatcaaat tgctgaacaa gatgaatagc cacattaatt caatgatttt aaaagactat
4081 ttggggaggg ttgggtatat aattttttag ctctatttac atcccaaagt agaaagatta
4141 aatttatatt tactagagct attcaaagaa tacacttttc tatattgtaa aaacaggaca
4201 gcaaagtaaa tcatacagaa aataaacatt tatactattc tgtaaaaaaa aaaaaaaaaa
4261 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaagaaaaaa aaaaaaaaaa aaa
//