LOCUS BX537769 2900 bp mRNA linear HUM 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp781B1340 (from clone DKFZp781B1340);
complete cds.
ACCESSION BX537769
VERSION BX537769.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2900)
AUTHORS Wambutt R., Heubner D., Mewes H.W., Weil B., Amid C., Osanger A.,
Fobo G., Han M., Wiemann S.
JOURNAL Submitted (17-JUN-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by AGOWA (Berlin/Germany) within the cDNA sequencing
consortium of the German Genome Project.
This clone (DKFZp781B1340) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..2900
/db_xref="H-InvDB:HIT000054554"
/organism="Homo sapiens"
/map="2p12-p11.1"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="781 (synonym: hlcc4). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp781B1340"
/tissue_type="human hippocampus"
/db_xref="taxon:9606"
CDS 184..1938
/codon_start=1
/gene="DKFZp781B1340"
/product="hypothetical protein"
/note="alpha N-catenin, differentially spliced"
/db_xref="GOA:P26232"
/db_xref="H-InvDB:HIT000054554.15"
/db_xref="HGNC:HGNC:2510"
/db_xref="InterPro:IPR000633"
/db_xref="InterPro:IPR001033"
/db_xref="InterPro:IPR006077"
/db_xref="InterPro:IPR036723"
/db_xref="PDB:6DUW"
/db_xref="UniProtKB/Swiss-Prot:P26232"
/protein_id="CAD97832.1"
/translation="MDGWRRPLQSVGKVCEKNMKTSEMHTMSGAQTGRKEKGDPLNIA
IDKMTKKTRDLRRQLRKAVMDHISDSFLETNVPLLVLIEAAKSGNEKEVKEYAQVFRE
HANKLVEVANLACSISNNEEGVKLVRMAATQIDSLCPQVINAALTLAARPQSKVAQDN
MDVFKDQWEKQVRVLTEAVDDITSVDDFLSVSENHILEDVNKCVIALQEGDVDTLDRT
AGAIRGRAARVIHIINAEMENYEAGVYTEKVLEATKLLSETVMPRFAEQVEVAIEALS
ANVPQPFEENEFIDASRLVYDGVRDIRKAVLMIRTPEELEDDSDFEQEDYDVRSRTSV
QTEDDQLIAGQSARAIMAQLPQEEKAKIAEQVEIFHQEKSKLDAEVAKWDDSGNDIIV
LAKQMCMIMMEMTDFTRGKGPLKNTSDVINAAKKIAEAGSRMDKLARAVADQCPDSAC
KQDLLAYLQRIALYCHQLNICSKVKAEVQNLGGELIVSGLDSATSLIQAAKNLMNAVV
LTVKASYVASTKYQKVYGTAAVNSPVVSWKMKAPEKKPLVKREKPEEFQTRVRRGSQK
KHISPVQALSEFKAMDSF"
regulatory 2827..2832
/regulatory_class="polyA_signal_sequence"
polyA_site 2846
BASE COUNT 912 a 545 c 714 g 729 t
ORIGIN
1 agaagcagag ttagataaaa tgtggtgcct accctgtgtg ttcacagttc tggagtggag
61 atgatgagta acaaaccaat attattcatg ctatggcaga gatgtaaaca agagctgtgg
121 ttgaagagat ttttctagct aattgagcaa gaccaggtag aggaaggaag acgaattgac
181 cagatggatg gatggagaag gccactccag tcagtaggca aagtctgtga aaaaaatatg
241 aagacttctg agatgcatac catgtctgga gcacagactg gaaggaaaga aaaaggagat
301 cctctcaaca ttgcgattga taagatgact aagaaaacaa gagatctaag gagacagctt
361 cggaaagcag tgatggatca catatctgac tctttcctgg aaaccaatgt tcctttgcta
421 gttctcattg aggctgcaaa gagcggaaat gaaaaggaag tgaaagaata tgcccaagtt
481 ttccgtgagc atgccaacaa actggtagag gttgccaatt tggcctgttc catctccaac
541 aatgaagaag gggtgaaatt agttcggatg gcagccaccc agattgacag cctgtgtccc
601 caggtcatca atgccgctct gacactggct gcccggccac agagcaaagt tgctcaggat
661 aacatggacg tcttcaaaga ccagtgggag aagcaggtcc gagtgttgac agaggccgtg
721 gatgacatca cctcagtgga tgacttcctc tctgtctcag aaaatcacat cttggaggat
781 gtgaacaagt gtgtgatagc cctccaagag ggcgatgtgg acactctgga ccggactgca
841 ggggccatca ggggccgggc agctcgagtc atacacatca tcaatgctga gatggagaac
901 tatgaagctg gggtttatac tgagaaggtg ttggaagcta caaaattgct ttctgaaaca
961 gtgatgccac gcttcgctga acaagtagag gttgccattg aagccctgag tgccaacgtt
1021 cctcaaccgt ttgaggagaa tgagttcatc gatgcctctc gcctggtgta tgatggcgtt
1081 cgggacatca gaaaggctgt gctgatgatc aggaccccag aagaactaga ggatgattct
1141 gactttgagc aggaagatta tgatgtgcgt agcaggacaa gtgttcagac tgaggatgac
1201 cagctcattg cagggcagag cgcacgggcc atcatggcgc aactaccgca ggaggagaag
1261 gcaaaaatag ctgagcaggt ggagatattc catcaagaga aaagcaagct ggatgcagaa
1321 gtggccaaat gggacgacag cggcaatgat atcattgtac tggccaagca gatgtgtatg
1381 atcatgatgg aaatgacaga cttcacaaga ggcaaaggcc cattgaaaaa tacatctgat
1441 gtcattaatg ctgccaagaa aattgccgaa gcaggttctc gaatggacaa attagctcgt
1501 gctgtggctg atcagtgtcc tgattcggca tgtaagcagg atttattagc ctaccttcaa
1561 cgaattgcct tgtattgcca tcagcttaat atctgcagca aggtgaaggc agaagtgcag
1621 aatctgggag gagagctcat tgtgtcaggg ctggacagtg ccacatcgct tatccaggca
1681 gctaaaaacc tgatgaatgc tgttgtcctc acggtgaaag catcctatgt ggcctcaacc
1741 aaataccaga aggtctatgg gacagcagct gtcaactcac ctgttgtgtc ttggaagatg
1801 aaggctccag agaagaagcc ccttgtgaag agagaaaagc ctgaagaatt ccagacacga
1861 gttcgacgag gttctcagaa gaaacacatt tcgcctgtac aggctttaag tgaattcaaa
1921 gcaatggatt ccttctagga cgataggttt taacaagaaa gctttttctt tcttttcttt
1981 ctttcttttt ctttttaatt ccatttttgt atgcatacct gccagctcgt atgcctctgg
2041 catggggaaa ttaagggaac agtgtctgtt tgcatgtaag atgagatgag atcaatacta
2101 ctgatccatc tgtagcctgg gaaggagaca ggacattcct gtactaaggt ggcacagagc
2161 tgtcctttgc aacattctca taaaattggg cacagagttc gcattggcgc aatatttatg
2221 ggagtgggag ggatggggaa aataaactta actctacaaa agcaaactct aatgcatgca
2281 agaatcatta ggttggcagg tatatgcata agtgaaaaat ctggaagtgt aatggtagaa
2341 cataaaactt gtattgcttc tgtttcagtg caaaaatgta ctagccaata cgcttaagtg
2401 tgtggcccat gaattgaaca atttaacctt gaagtctata tccgtgatat tatgtcgatt
2461 tttaactgag gggaaattaa ctagtccagc ctaaaatgct tcttttaatc tgcattctgt
2521 ttcctcttct agttgtgcca ttactagtga taatgttttt ttcccccctt taatgaaaac
2581 aataaacatc tatttgagac aattaaaatc cttctggggg cactggaagc acaatacggt
2641 gaccaatctt gctttcattt ttttttcttt tttaatttga accatgattt tgctagaaat
2701 agaaggccca gtggtggaat attagaggga aggaaactga caacgtgtga aagttagagg
2761 caaatacata ggtgtagctt ggagtgctgg tatctaatat accattgtat tcactaacta
2821 actcaaaata aacacattta atcttgaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2881 gaaaaaaaaa aaaaaaaaaa
//