LOCUS BX537754 4066 bp mRNA linear HUM 16-OCT-2008 DEFINITION Homo sapiens mRNA; cDNA DKFZp686O1682 (from clone DKFZp686O1682); complete cds. ACCESSION BX537754 VERSION BX537754.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4066) AUTHORS Wambutt R., Heubner D., Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M., Wiemann S. JOURNAL Submitted (17-JUN-2003) to the INSDC. MIPS, Ingolstaedter Landstr.1, D-85764 Neuherberg, GERMANY COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de; sequenced by AGOWA (Berlin/Germany) within the cDNA sequencing consortium of the German Genome Project. This clone (DKFZp686O1682) is available at the RZPD in Berlin. Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6, 14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de Further information about the clone and the sequencing project is available at http://mips.gsf.de/proj/cDNA/ FEATURES Location/Qualifiers source 1..4066 /db_xref="H-InvDB:HIT000054539" /organism="Homo sapiens" /map="1q21.2" /mol_type="mRNA" /dev_stage="adult" /clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host DH10B; sites SfiIA + SfiIB" /clone="DKFZp686O1682" /tissue_type="human retina" /db_xref="taxon:9606" CDS 488..2716 /codon_start=1 /gene="DKFZp686O1682" /product="hypothetical protein" /note="similar to synaptic vesicle protein SV2 (Rattus norvegicus)" /db_xref="GOA:Q7L0J3" /db_xref="H-InvDB:HIT000054539.15" /db_xref="HGNC:HGNC:20566" /db_xref="InterPro:IPR001646" /db_xref="InterPro:IPR005828" /db_xref="InterPro:IPR005829" /db_xref="InterPro:IPR011701" /db_xref="InterPro:IPR020846" /db_xref="InterPro:IPR022308" /db_xref="InterPro:IPR036259" /db_xref="PDB:4V11" /db_xref="UniProtKB/Swiss-Prot:Q7L0J3" /protein_id="CAD97824.1" /translation="MEEGFRDRAAFIRGAKDIAKEVKKHAAKKVVKGLDRVQDEYSRR SYSRFEEEDDDDDFPAPSDGYYRGEGTQDEEEGGASSDATEGHDEDDEIYEGEYQDIP RAESGGKGERMADGAPLAGVRGGLSDGEGPPGGRGEAQRRKEREELAQQYEAILRECG HGRFQWTLYFVLGLALMADGVEVFVVGFVLPSAEKDMCLSDSNKGMLGLIVYLGMMVG AFLWGGLADRLGRRQCLLISLSVNSVFAFFSSFVQGYGTFLFCRLLSGVGIGGSIPIV FSYFSEFLAQEKRGEHLSWLCMFWMIGGVYAAAMAWAIIPHYGWSFQMGSAYQFHSWR VFVLVCAFPSVFAIGALTTQPESPRFFLENGKHDEAWMVLKQVHDTNMRAKGHPERVF SVTHIKTIHQEDELIEIQSDTGTWYQRWGVRALSLGGQVWGNFLSCFGPEYRRITLMM MGVWFTMSFSYYGLTVWFPDMIRHLQAVDYASRTKVFPGERVGHVTFNFTLENQIHRG GQYFNDKFIGLRLKSVSFEDSLFEECYFEDVTSSNTFFRNCTFINTVFYNTDLFEYKF VNSRLINSTFLHNKEGCPLDVTGTGEGAYMVYFVSFLGTLAVLPGNIVSALLMDKIGR LRMLAGSSVMSCVSCFFLSFGNSESAMIALLCLFGGVSIASWNALDVLTVELYPSDKR TTAFGFLNALCKLAAVLGISIFTSFVGITKAAPILFASAALALGSSLALKLPETRGQV LQ" polyA_site 4042 BASE COUNT 837 a 1088 c 1151 g 990 t ORIGIN 1 ggggctggag tggtggaagg ggggtggcag gtctgcattg ccgcttccct ggtgccggga 61 gcagtcgccg ctgccgcctc cgcccgcggc caggaccccc gtcctcgccc gggactcctt 121 acccggggaa cctagaccag gtctccagag gcttgtggaa gagaagcagg cgacccttcc 181 tgagttatcc tggcttagcc tcccaatctg gctccccttc cccttcccat tcccctgctc 241 cccctgtccc ttccccatcc acccaactga actgggtata ggtcaaagct cctctccttc 301 cttttccttc ctaggcactc attggctagg acctgtttgc tctttttttt gtgcccagag 361 atactggaac acgcttcatc taagtaactg tggggagggg tctttttgac tctacaagtc 421 cttgagcaaa aagctgaaaa agaagcagga ggtggagaag acccagtgaa gtgccccaag 481 ccccatcatg gaagagggct tccgagaccg ggcagctttc atccgtgggg ccaaagacat 541 tgctaaggaa gtcaaaaagc atgcggccaa gaaggtggtg aagggcctgg acagagtcca 601 ggacgaatat tcccgaagat cgtactcccg ctttgaggag gaggatgatg atgatgactt 661 ccctgctccc agtgatggtt attaccgagg agaagggacc caggatgagg aggaaggtgg 721 tgcatccagt gatgctactg agggccatga cgaggatgat gagatctatg aaggggaata 781 tcaggacatt ccccgggcag agtctggggg caaaggcgag cggatggcag atggggcgcc 841 cctggctgga gtaagggggg gcttgagtga tggggagggt ccccctgggg gccgggggga 901 ggcacaacga cggaaagaac gagaagaact ggcccaacag tatgaagcca tcctacggga 961 gtgtggccac ggccgcttcc agtggacact gtattttgtg cttggtctgg cgctgatggc 1021 tgacggtgtg gaggtctttg tggtgggctt cgtgctgccc agcgctgaga aagacatgtg 1081 cctgtccgac tccaacaaag gcatgctagg cctcatcgtc tacctgggca tgatggtggg 1141 agccttcctc tggggaggtc tggctgaccg gctgggtcgg aggcagtgtc tgctcatctc 1201 gctctcagtc aacagcgtct tcgccttctt ctcatctttt gtccagggtt acggcacttt 1261 cctcttctgc cgcctacttt ctggggttgg gattggaggg tccatcccca ttgtcttctc 1321 ctatttctcc gagtttctgg cccaggagaa acgaggggag catttgagct ggctctgcat 1381 gttttggatg attggtggcg tgtacgcagc tgctatggcc tgggccatca tcccccacta 1441 tgggtggagt tttcagatgg gttctgccta ccagttccac agctggaggg tcttcgtcct 1501 cgtctgcgcc tttccttctg tgtttgccat tggggctctg accacgcagc ctgagagccc 1561 ccgtttcttc ctagagaatg gaaagcatga tgaggcctgg atggtgctga agcaggtcca 1621 tgataccaac atgcgagcca aaggacatcc tgagcgagtg ttctcagtaa cccacattaa 1681 gacgattcat caggaggatg aattgattga gatccagtcg gacacaggga cctggtacca 1741 gcgctggggg gtccgggcct tgagcctagg ggggcaggtt tgggggaatt ttctctcctg 1801 ttttggtccc gaatatcggc gcatcactct gatgatgatg ggtgtgtggt tcaccatgtc 1861 attcagctac tatggcctga ccgtctggtt tcctgacatg atccgccatc tccaggcagt 1921 ggactatgca tcccgcacca aagtgttccc cggggagcgc gtagggcatg taacttttaa 1981 cttcacgttg gagaatcaga tccaccgagg cgggcagtac ttcaatgaca agttcattgg 2041 gctgcggctc aagtcagtgt cctttgagga ttccctgttt gaagagtgtt attttgagga 2101 tgtcacatcc agcaacacgt ttttccgcaa ctgcacattc atcaacactg tgttctataa 2161 cactgacctg ttcgagtaca agtttgtgaa cagccgtctg ataaacagta cattcctgca 2221 caacaaggag ggctgcccgc tagacgtgac agggacgggc gaaggtgcct acatggtata 2281 ctttgtgagc ttcctgggga cactggcagt gcttcctggg aatatcgtgt ctgccctgct 2341 catggacaag atcggcaggc tcagaatgct tgctggctcc agcgtgatgt cctgtgtctc 2401 ctgcttcttc ctgtcttttg ggaacagtga gtcggccatg atcgctctgc tctgcctttt 2461 tggcggggtc agcattgcat cctggaatgc gctggacgtg ttgactgttg aactctaccc 2521 ctcagacaag aggaccacag cttttggctt cctgaatgcc ctgtgtaagc tggcagctgt 2581 gctggggatc agcatcttca catccttcgt gggaatcacc aaggctgcac ccatcctctt 2641 tgcctcagct gcccttgccc ttggcagctc tctggccctg aagctgcctg agacccgggg 2701 gcaggtgctg cagtgaaggg gtctctaggg ctttgggatt ggcaggcaca ctgtgagacc 2761 aacaactcct tccttcccct ccctgccctg ccatcctgac ctccagagcc ctcactcccc 2821 actccccgtg tttggtgtct tagctgtgtg tgcgtgtgcg tgtgcatgtg tgtaaacccc 2881 gtgggcaggg actacaggga aggctccttc atcccagttt tgagatgaag ctgtactccc 2941 catttcccac tgcccttgac tttgcacaag agaaggctga gccccatcct tctccccctg 3001 ttagagaggg gcccttgctt ccctgttcca ggggttccag aataggcttc ctgccttccc 3061 catcattccc tctgcctagg ccctggtgaa accacaggta tgcaattatg ctaggggctg 3121 gggctctggt gtagaccatg gaccaaaaga acttcttgga gtctgaagag tgggcctcgg 3181 gtgccctctc acatctcctg ttggatgctg ggggagaagc aataaacctc agccctctgg 3241 cctccacttt cctctcaatt tgggctgcaa atatgaagcc tgaattttat gaaattagct 3301 ttctgattct tatttattaa tagattaagt tctgaggcag ctccgcagga ctgtgtgtga 3361 atgtgtatgt atacttacat atgtgtgtgc atgtgccatg gggcgggggg tatcactata 3421 ctgtcctcaa atataagcca agggtaattt cagcggatgc acacacaacc ctgcctccca 3481 cagttcctcc cctaatctgg tttctgtgtt gagcctggga tggaggagcc ctaggccagc 3541 ctgggataag agtcccacag tctagggaga tctgagggca tccgacaagg cccatctcct 3601 tccctcctca agaggcagag gcctcctctg gagtgagagg ctccacccac tacagcacag 3661 gcgggaatag cacagctgcc ctcccatgct ccctacctgt cccctcacag ggaggggagc 3721 aggggaggga aagaaaccag gcatctggtc aaaccagcag atcaaaaagc acaaagagct 3781 ggggcagagg caggaagcag gggccctcct ggcagctcct ctgagtgggg agaggttggg 3841 cagtgagtga gggaccccta atgcagggac tagaagcctc agtttcccca ttttaccctt 3901 ccacacaata gcctctgtag gttaggctgc cccatcccac cctactctgt gtggctgctt 3961 tctttggtgc cctcccctca ccccactgta gctgtgacgt gttgtagttt ttagatgttt 4021 gtaaaatgtt taaaaaaatg ttaaaagaaa aaaaaaaaaa aaaaaa //