LOCUS BX537652 7932 bp mRNA linear HUM 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686G1990 (from clone DKFZp686G1990);
complete cds.
ACCESSION BX537652
VERSION BX537652.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 7932)
AUTHORS Lauber J., Bahr A., Mewes H.W., Weil B., Amid C., Osanger A.,
Fobo G., Han M., Wiemann S.
JOURNAL Submitted (17-JUN-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by Qiagen (Hilden/Germany) within the cDNA sequencing
consortium of the German Genome Project.
This clone (DKFZp686G1990) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..7932
/db_xref="H-InvDB:HIT000054437"
/organism="Homo sapiens"
/chromosome="3q21.1"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686G1990"
/tissue_type="human retina"
/db_xref="taxon:9606"
CDS 4476..6857
/codon_start=1
/gene="DKFZp686G1990"
/product="hypothetical protein"
/note="hypothetical protein, differentially spliced"
/db_xref="GOA:Q49A88"
/db_xref="H-InvDB:HIT000054437.14"
/db_xref="HGNC:HGNC:25766"
/db_xref="InterPro:IPR029343"
/db_xref="UniProtKB/Swiss-Prot:Q49A88"
/protein_id="CAD97804.1"
/translation="MPMESASSDNKKQIPNEASARSERDTSDLEQNWSLQDHYRMYSP
IIYQALCEHVQTQMSLMNDLTSKNIPNGIPAVPCHAPSHSESQATPHSSYGLCTSTPV
WSLQRPPCPPKVHSEVQTDGNSQFASQGKTVSATCTDVLRNSFNTSPGVPCSLPKTDI
SAIPTLQQLGLVNGILPQQGIHKETDLLKCIQTYLSLFRSHGKEPHLDSQTHRSPTQS
QPAFLATNEEKCAREQIREATSERRDLNIHVRDTKTVKDVQKAKNVNKTAEKVRIIKY
LLGELKALVAEQEDSEIQRLITEMEACISVLPTVSGNTDIQVEIALAMQPLRSENAQL
RRQLRILNQQLREQQKTQKPSGAVDCNLELFSLQSLNMSLQNQLEESLKSQELLQSKN
EELLKVIENQKDENKKFSSIFKDKDQTILENKQQYDIEITRIKIELEEALVNVKSSQF
KLETAEKENQILGITLRQRDAEVTRLRELTRTLQTSMAKLLSDLSVDSARCKPGNNLT
KSLLNIHDKQLQHDPAPAHTSIMSYLNKLETNYSFTHSEPLSTIKNEETIEPDKTYEN
VLSSRGPQNSNTRGMEEASAPGIISALSKQDSDEGSETMALIEDEHNLDNTIYIPFAR
STPEKKSPLSKRLSPQPQIRAATTQLVSNSGLAVSGKENKLCTPVICSSSTKEAEDAP
EKLSRASDMKDTQLLKKIKEAIGKIPAATKEPEEQTACHGPSGCLSNSLQVKGNTVCD
GSVFTSDLMSDWSISSFSTFTSRDEQDFRNGLAALDANIARLQKSLRTGLLEK"
regulatory 7890..7895
/regulatory_class="polyA_signal_sequence"
polyA_site 7913
BASE COUNT 2582 a 1337 c 1561 g 2452 t
ORIGIN
1 gaagcttgaa gacattatgc taagtgaaat aagccagtca caaaagaaca aatattgtat
61 tatttcagtt atataaagtt tctagactag tcaaattcat agaaactagg atgatagttg
121 ctagggtcag ggagaagagg ggatggaaag gtattgttta atggatgcag agtttcagtt
181 tgagaagatg aataaaagaa aaaaatgaca ttaaattttg tcaagatagc atattgaaaa
241 tataatagaa aaatatttgt ttatctgcta taatatatta tgtcataggt gttatcttca
301 ggaaggcaca ctggacctgc taaattaaca aatggaaaga aagcgtaagt acttgaagac
361 gtttacaact tcagatttca aggaattttt caggtctttg ggctggatga catgtcgtct
421 accccagaaa attaggtagg cctctaccat cacaagctct gaggaacaat ttttcatgtc
481 tacccatgtt aatcatttta gtatttaaca gtctttctga tcttcagaat gtgtttataa
541 attcatcttg tacatggttg gacaagcttt cttgtctttg ctggaaagaa aatgactact
601 tactaatata ttttgggaaa aatatttgta agaatattaa taagcttgtt ttccaggacc
661 tatttaagaa aaataccacg ttttaatgca gattctggct attccatcca ttctgattca
721 gaaagtcagg taagattgaa tagatacaat acacactatt ttaattagtt ttcaaatagt
781 agctaaaaag taggaataaa atgcaaagta ttaattgctc taaggaagta tgaagtctgt
841 tgctttaaaa catcttttct accaataata gtttgtaaat aaacaaattt taaaactaca
901 taatttatat tttttcctac actaacagtc atatacaaat gtattctaaa tgactttatt
961 tcttacaggc tgaaactgta cacgggcttg atggttgtgc ttctttgctg agggacattt
1021 tgagaaatga agattcaggt tttttttttt ttaattcttt gctgatcacc ttatctcaag
1081 tcattatttt gatgtaacaa atttttgttt tattaatagg ttcagaaaca gcatatttag
1141 aaaacagatc taattctaga cctttagaaa gcaaaagata cggatcaaaa aagaaaagac
1201 atgaaaaaca tactattcct ttggtagtcc agaaagaaac atgtaagcct tttttctctt
1261 agttatttaa agatgatcct taattgtggg tattttgatc aattatcagg attatacagt
1321 tgattttcat tttaataatc agtattagtt aggtttatgt gtgcttatgc ctttctgtat
1381 tcagcttcta atcactgagt agtccacttt gcttgctatc attttctcaa gaagaaaaat
1441 agaaaaagag actgtcaggg ttttgtagga gaaaaagttc aaactcagaa tgacatttgg
1501 gaggtatata gagtgatctt agtttcccct gccacttgtt ttcatagata atcataaatt
1561 ggttgtattt caagtgtata cttctagtag ttgccttaaa attattatat ttatatatat
1621 atatatccta agttggtcaa gctgaacttg tcaagctaca cagttaggat acatggtaca
1681 taggaaggta aaatcggatg aataaggaaa ggctgctgct gattggtggt gagtatagcc
1741 aagggtactt tacaccctca cggctaactt ttcctagttt agaacaagaa agttttgatt
1801 atgttgtccc ttggaggcct agaaaacaag atagcccaaa atgaagatga aaaagtccac
1861 agtgggaatt cagatggact agaattagac tagccagttc tatagttcag gtgggccaga
1921 aatgtcagca ctgtagtacg tgcttagatt cagcttgggc aaggaatgaa gtttagaaag
1981 tcatataaag cagtagccct ataaagagat caggatttaa gcaaggaggc tgagaaagtg
2041 tcagtagagc attcatggga ctagaggttg atgtttcaga tagtcccaag gtagagaact
2101 aaggcaaggg aaacctaact catcttggag gccagtaatg atagctttat attatcttga
2161 cctgtgctat tcaagatggt agccactggc cacatgtggc tattcagcac ttgaaatgtg
2221 actagtacaa ccaaggaatt gaattttaat gttatttaat ttaaattaat ttaaaattaa
2281 attagaaaac tgataattga tccagttatt ataaaacttt taagtatgtt tggaataact
2341 tgggcatgtg aacctacctt ttcaagtgta aattttatta aatctaaata tagaccaagt
2401 atttctgatg agaatttagc atctagattg tgctttgtgt aaaatatatg ctagatttag
2461 aagatttaat acaaaatttc agttatttat attatacact gaaatgttaa tattttggat
2521 atattgattt aaatattatg aaaagtaatt ttacctattt tatatggtta ctggaaattt
2581 caagttacat atatggtttg tattatattt ctattggaca gcattggtct aagctcaata
2641 cactacagcc agttttataa gtaatgttta gttattttat tgtgtaaata agattttatt
2701 agaatgcagc caagctaatt tattaatgtg tttttattag ctgtttttgt gctgcagtgt
2761 cagagttgag tagttttgac agagatcatc tggcctgcta aacctaaaat atttatttga
2821 cctttgaaga aagagtgcta aaccctggcc ttaactcttt aaagcagagg cctttttatt
2881 ggggcccaac tgagaaggaa aggagcggta gcacctgttc ctccagtctc ctactttttg
2941 tctgtaggca ggttatttct tatccagggc accttttcct caaggaacta ttatttgcaa
3001 tatatgtgac tggcagtggg tgtcatggta tcaacttact ggatcctgac ttaactgctt
3061 ctgtcggtca gagttccaac aagaaacaga tggcaacact caaattgagg taattttagg
3121 agggtttatt tacaaaggga ctcatgaagg tatgaatagg gtataggaaa accacaggtt
3181 ttgcctacta ggtcatgcga gcctagtgct agcagcagag cagcagagct gttatcatct
3241 ctaggccata agggattagg agagagagag gttactggat ctagaaagag atactgttta
3301 tagaatacgc taccttgaga agagcagtga gcttcattga aatgacgaag gcagcccaag
3361 gtggccttat agaaagggag caggaataag tgtatatcct gacttcatgc ttcttccttt
3421 ccttgatatg ccaagactcc cattggattg aacccaactg aagccctact gatgtatatc
3481 aggtctggga tttgactctt acaagctagt aagttagtct tactgtgtca tggatgctag
3541 cagaagacaa gactactggg tcagagacaa aggactttat tactcacagc acaggaagca
3601 gtatgtgcat cagcatattg tgttggttct cattcaccct agttcccatt ggggtgatat
3661 ggtggaccca tatggatgct gcacatgcct taggtttagg ttgcagctga ggaacactga
3721 gcttggggaa tccgtcactt tggtagtaag cagtaatcaa gcctgtgctt gtcccagagg
3781 gaaacattac ctcatccttc aaggttgctc actgcagaca caaccctgag aagcggccca
3841 ggtaaggagt ttaggtcaaa gccttgcttt tttggtatat acagcaagac atattgaagg
3901 actgtctttt tgcagcccat atggatcagc attccaggga gaccagggtg aagaccagta
3961 gaggtgggtt tggattggca gatggaagat tctggcattc tgggtccata gcgttaaatt
4021 cttatttgga ttacagccga atcagcagtt ctggcctgtg atcagggtgc aatattctta
4081 ttgttctttc tcccatattt tcttaatcag aaggaaggac ctacttccac aggacaatct
4141 tctttagggt tgcaatatta gaaattagtt tctagttgtg tgtgtgtgtg gttggcagct
4201 gttaaccaat aatacaagat tttgctttgt taccacaatg ctcaaaaata cacaaaatcc
4261 aagctcataa cttgttctct ttaccgtctc caagtgaagt aatcataaag aactttaagc
4321 gatctattac agcatgttaa ctagtatcca tgtattattt tacttttaac acacattatc
4381 ttgctatttt gtgttaactg tcttctgggg agtggcctcc ttatgtactt tctatctggg
4441 atgatatgat cattgaatgc ctacctgatc actgaatgcc tatggagtca gcatcttcag
4501 ataataagaa acagatacct aatgaagctt ctgctagaag tgaaagagac acatcagacc
4561 tagagcaaaa ctggtcattg caagatcatt atagaatgta ttcacccata atataccaag
4621 ccctctgtga gcacgtgcag actcagatgt cactgatgaa tgacttgact tcaaagaaca
4681 tccctaatgg aattcctgct gtaccatgcc atgctccctc tcattctgaa tctcaggcaa
4741 ctcctcattc tagttatggc ttatgtacct ccaccccagt ctggtcactt cagcggccac
4801 cctgccctcc aaaggttcat tctgaagttc aaactgatgg caacagtcag tttgcatcac
4861 aaggtaaaac agtttctgca acctgtactg atgttctacg gaattcattt aataccagtc
4921 ctggagttcc atgtagcctg cccaaaactg acatatcagc tattccaaca ttgcagcaac
4981 tgggccttgt taatggaatt ctgccacaac aaggaattca taaggaaaca gacctactaa
5041 aatgtattca aacatatttg tctctttttc gatctcatgg aaaagaaccg catctggaca
5101 gtcagacaca ccgaagccct actcagtcac aaccagcttt cttggccact aatgaagaaa
5161 aatgtgccag agagcaaatt agagaggcca caagtgaaag aagggattta aacatacatg
5221 tgcgagatac aaaaacagtg aaggatgtac agaaggcaaa aaatgtgaac aagacagctg
5281 aaaaagttag aattataaaa tatttgttgg gagagctcaa ggccctggta gcagaacaag
5341 aggattcaga aattcagagg ttgattacag aaatggaggc atgtatatct gtacttccaa
5401 cagtaagtgg aaacacagat attcaagttg agatagcact ggccatgcaa ccattaagaa
5461 gtgagaatgc tcagttacga aggcagttga gaattttgaa ccagcaactc agagaacaac
5521 agaaaactca aaaaccatct ggtgctgtgg attgcaacct tgaattgttt tctcttcagt
5581 cattgaatat gtcactgcaa aatcaattgg aggagtcact aaagagccag gaattactgc
5641 agagtaaaaa tgaagagctg ttaaaagtga ttgaaaacca gaaagatgaa aacaaaaaat
5701 ttagtagtat atttaaagac aaagatcaaa ctatacttga aaataaacag caatatgata
5761 ttgagataac aagaataaaa attgaattgg aggaagccct agtcaatgtg aaaagctccc
5821 agtttaagtt agaaactgct gaaaaggaaa accagatatt ggggataaca ttacgtcagc
5881 gtgatgctga ggtgactcga ctaagagaat taaccagaac tttacagact agcatggcaa
5941 agcttctctc cgatcttagt gtggacagtg ctcgctgcaa gcctgggaat aaccttacca
6001 aatcactctt gaacattcat gataaacaac ttcaacatga cccagctcct gctcacactt
6061 ccataatgag ctatctaaat aagttagaaa caaattacag ttttacacat tcagagccac
6121 tttctacaat taaaaatgag gaaaccatag agccagacaa aacctatgaa aatgttctgt
6181 cctccagagg ccctcaaaat agtaacacta ggggcatgga ggaagcatct gcacctggaa
6241 ttatttctgc cctttcaaaa caggattctg atgaagggag tgaaactatg gctttaatag
6301 aagatgagca taatttggat aatacaattt acattccttt tgctagaagc actcctgaaa
6361 agaaatcacc actttctaag agactatccc ctcagccaca aataagagca gctacaacac
6421 agctagtcag caacagtgga cttgctgtct ctggaaaaga aaataaactg tgtacacctg
6481 taatctgttc ctcttcaaca aaggaagcag aagatgcacc tgaaaaactt tccagagcat
6541 ctgatatgaa ggacacacag ctcctcaaga aaataaagga agcaattggt aagatccctg
6601 ctgccaccaa ggagccagag gaacaaactg catgtcatgg cccatcaggt tgtcttagca
6661 acagccttca agtgaaaggc aatactgtct gtgatggtag tgttttcact tctgacttga
6721 tgtctgactg gagcatctct tcgttttcaa cgttcacttc tcgtgatgaa caagacttca
6781 gaaatggcct tgcggcatta gatgccaaca tagctagact ccagaagtct ttaaggactg
6841 gtcttctgga gaaatgaatt cagaagaaaa ttcatcaggt gcttcttttt aaaactagaa
6901 cttggctata ttgaatgtgt atttttcttt agtgaaatga tgttttatgt tattatgtgt
6961 gaagtaatat attgtacaag taataaatgt attgttgaga tatattgaca ctgaggagct
7021 tataaaaaca agtcatctta agttcacaat tgctacaaga agaaagttgt ggataactag
7081 gaaattattg taagtaatgt tttatttcag tacttagcaa ttagagttct tttattaaga
7141 tgtatctgct ggattaaggg tacaggttga aatagttctg tggctgtcct aagaaataat
7201 gggaaaagaa tctctggatg taagtttttc tgttgaaact agagggtttt ttttctgttt
7261 acatatactt ttttttaata gcaatgtgtt tttattaaac atgctgtgtg ccacaggcca
7321 gtgttgttgg tgaaatatat aaacatttat ttaaagagaa aagttaccag tatctacacc
7381 tcttaaaaaa cattgattgg tctaaaaaat atatagataa catcctaagt taacatatgg
7441 cttcttaaaa cttgggcact tttatttgtt tttatcccaa attcatgttt taaggccttt
7501 aaagaatagt cagactgata aagaagtgct aacagataag ctatagttgg ggaaatttgt
7561 gggttttttt taaataagaa atgtttattt ttgtccttat atttaaacat gatggaattt
7621 gtaaatcttg gcattgattg taattctgcc tttttggaag aattttttct cccagcatgt
7681 tagctgagaa tattctctat tttataaata atatgaagta ggttggtctc tctgcttctc
7741 tataccagga cttcttagct cagtatcatc tcccttcatg taagcagcac gttttaactc
7801 ttaggaagct gaatgttgtg ttatcactaa tactttgtac aggtcacctg cctactctaa
7861 ttgtccttag tacttggaca ggctttatca ttaaagagtg ttctcctaat cccaaaaaaa
7921 aaaaaaaaaa aa
//