LOCUS BX537537 4181 bp mRNA linear HUM 21-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp313O1925 (from clone DKFZp313O1925).
ACCESSION BX537537
VERSION BX537537.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4181)
AUTHORS Poustka A., Albert R., Moosmayer P., Schupp I., Wellenreuther R.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
JOURNAL Submitted (17-JUN-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by DKFZ (German Cancer Research Center,
Heidelberg/Germany) within the cDNA sequencing consortium of
the German Genome Project.
This clone (DKFZp313O1925) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..4181
/db_xref="H-InvDB:HIT000054322"
/organism="Homo sapiens"
/map="1p34.3"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="313 (synonym: hlcc2). Vector pTriplEx2; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp313O1925"
/tissue_type="human heart"
/db_xref="taxon:9606"
CDS join(130..411,411..3557)
/codon_start=1
/gene="DKFZp313O1925"
/product="hypothetical protein"
/note="hypothetical protein"
/note="The frame shift was determined manually"
/db_xref="GOA:Q5SVZ6"
/db_xref="H-InvDB:HIT000054322.14"
/db_xref="HGNC:HGNC:26253"
/db_xref="InterPro:IPR008906"
/db_xref="InterPro:IPR010507"
/db_xref="InterPro:IPR011017"
/db_xref="InterPro:IPR012337"
/db_xref="InterPro:IPR025398"
/db_xref="UniProtKB/Swiss-Prot:Q5SVZ6"
/protein_id="CAD97777.1"
/translation="MKEPLLGGECDKAVASQLGLLDEIKTEPDNAQEYCHRQQSRTQE
NELKINAVFSESASQLTAGIQLSLASSGMNKMLPSVSTTAIQVSCAGCKKILQKGQTA
YQRKGSAQLFCSIPCITEYISSASSPVPSKRTCSNCSKDILNPKDVISVQLEDTTSCK
TFCSLSCLSSYEEKRKPFVTICTNSILTKCSMCQKTAIIQYEVKYQNVKHNLCSNACL
SKFHSANNFIMNCCENCGTYCYTSSSLSHILQMEGQSHYFNSSKSITAYKQKPAKPLI
SVPCKPLKPSDEMIETTSDLGKTELFCSINCFSAYSKAKMESSSVSVVSVVHDTSTEL
LSPKKDTTPVISNIVSLADTDVALPIMNTDVLQDTVSSVTATADVIVDLSKSSPSEPS
NAVASSSTEQPSVSPSSSVFSQHAIGSSTEVQKDNMKSMKISDELCHPKCTSKVQKVK
GKSRSIKKSCCADFECLENSKKDVAFCYSCQLFCQKYFSCGRESFATHGTSNWKKTLE
KFRKHEKSEMHLKSLEFWREYQFCDGAVSDDLSIHSKQIEGNKKYLKLIIENILFLGK
QCLPLRGNDQSVSSVNKGNFLELLEMRAKDKGEETFRLMNSQVDFYNSTQIQSDIIEI
IKTEMLQDIVNEINDSSAFSIICDETINSAMKEQLSICVRYPQKSSKAILIKERFLGF
VDTEEMTGTHLHRTIKTYLQQIGVDMDKIHGQAYDSTTNLKIKFNKIAAEFKKEEPRA
LYIHCYAHFLDLSIIRFCKEVKELRSALKTLSSLFNTICMSGEMLANFRNIYRLSQNK
TCKKHISQSCWTVHDRTLLSVIDSLPEIIETLEVIASHSSNTSFADELSHLLTLVSKF
EFVFCLKFLYRVLSVTGILSKELQNKTIDIFSLSSKIEAILECLSSERNDVYFKTIWD
GTEEICQKITCKGFKVEKPSLQKRRKIQKSVDLGNSDNMFFPTSTEEQYKINIYYQGL
DTILQNLKLCFSEFDYCKIKQISELLFKWNEPLNETTAKHVQEFYKLDEDIIPELRFY
RHYAKLNFVIDDSCINFVSLGCLFIQHGLHSNIPCLSKLLYIALSWPITSASTENSFS
TLPRLKTYLCNTMGQEKLTGPALMAVEQELVNKLMEPERLNEIVEKFISQMKEI"
regulatory 4131..4136
/regulatory_class="polyA_signal_sequence"
polyA_site 4150
BASE COUNT 1417 a 713 c 759 g 1292 t
ORIGIN
1 ggcttcgaag attgtttcag aagcgttggg cggcgggcgt ccctgagaga aattagaatc
61 tggaaactgt tcttcaggaa gaaacccatt agtttggaac tggagaattc ctttgcatca
121 gatactaaaa tgaaagaacc acttttaggt ggtgagtgtg acaaggcagt ggcatcacag
181 ctggggctgc tagatgaaat taagacagaa cccgacaatg ctcaagagta ttgtcatagg
241 caacagtcca gaactcagga gaatgaactg aaaataaatg ctgtgttttc agagagtgct
301 tcacagttga ctgcaggcat tcagctttct ctggcatcat ctggcatgaa taaaatgctt
361 ccttcagttt caaccacagc tattcaggtt tcctgtgctg gttgtaaaaa attctccaga
421 aggggcaaac tgcttatcag aggaaaggat ctgctcaact tttctgctcc ataccatgca
481 tcactgaata catttcatct gccagttcac cagttccttc taagagaact tgttcaaact
541 gctcaaaaga cattttaaat ccaaaggatg tgattagtgt ccagctggaa gacactacct
601 cttgcaaaac tttttgcagc ctatcttgtc tttcatcata tgaagaaaaa agaaaaccat
661 ttgttaccat atgtactaat agcattttga ccaagtgcag catgtgccag aagactgcta
721 ttattcagta tgaagtaaaa taccaaaatg tgaaacataa tctttgcagt aatgcctgcc
781 tttcaaagtt tcactctgct aacaacttca tcatgaactg ctgtgagaac tgtggcactt
841 actgttacac cagctctagt ctgtcccaca tacttcagat ggaaggacag tctcattact
901 ttaatagttc aaagagtatt acagcatata agcagaaacc tgccaaacca cttatatctg
961 ttccttgcaa accattgaag ccctcagatg aaatgattga gactacgagt gatttgggga
1021 agacagagct tttctgctct attaattgtt tctctgcata cagtaaagct aagatggaat
1081 cttcttcagt aagtgttgtt tctgtggtgc atgatacttc aacagagctt ctttctccaa
1141 agaaagatac gactccagtt ataagcaata tagtgtcatt ggcagacacc gatgttgcct
1201 tgcccatcat gaacactgat gtcttacaag atacagtttc ttcagtaaca gcaacagcag
1261 atgtcattgt ggatctttct aagagttcac ctagtgaacc cagtaatgct gttgctagta
1321 gtagtacgga acagccaagc gtttcaccat cttcatcagt attcagtcag catgcaattg
1381 gttccagtac agaagtacaa aaagacaata tgaaatctat gaaaataagt gatgaactat
1441 gtcacccaaa atgtacatcc aaagtacaaa aagttaaagg taaatcacga agtattaaaa
1501 aatcttgttg tgcagatttt gagtgtttgg aaaacagtaa aaaagatgtg gcattctgtt
1561 attcatgcca gttgttctgc caaaaatatt ttagctgtgg aagagagtca tttgcaaccc
1621 acggaacttc taattggaaa aaaaccctgg aaaaattcag aaagcatgaa aaaagtgaaa
1681 tgcatttgaa gtcattggaa ttttggagag aataccaatt ttgtgatgga gctgtcagtg
1741 acgatttatc tattcattcg aaacagattg agggaaataa aaagtaccta aagcttataa
1801 ttgaaaatat tttatttctt ggaaagcagt gtttaccctt aagaggaaac gaccagtcag
1861 tttcatctgt gaataaaggc aattttttag aattgttaga aatgagagca aaagataaag
1921 gagaagaaac atttcgactt atgaattcac aagttgactt ctataacagt acacaaattc
1981 aaagtgatat tatcgaaata ataaagactg aaatgttgca ggatattgtg aatgagatca
2041 atgactcctc agcattttca atcatatgtg atgagacaat caatagtgcc atgaaagaac
2101 agctttcaat ttgtgtaaga tacccacaaa aatcatcaaa ggctatctta attaaggaaa
2161 gattcttggg ttttgttgat actgaggaga tgactgggac ccacttacat aggactatca
2221 aaacttatct gcagcaaatt ggagttgata tggataaaat acatggccag gcctatgata
2281 gcaccactaa tttgaagata aaatttaata aaatagcagc agaattcaag aaagaagaac
2341 caagagcttt atacatacat tgttatgcac actttttgga tttatcaata attaggtttt
2401 gtaaagaagt aaaagaactc cgaagtgctc taaaaactct cagttctttg ttcaacacta
2461 tttgtatgtc tggggaaatg ttggcaaatt ttcgaaacat ttataggcta agtcaaaaca
2521 aaacatgcaa gaaacatata tcacaatcat gttggacagt ccatgatcgt acattactat
2581 ctgtgattga cagtcttcca gagattattg aaacattgga agttatagca agccattctt
2641 caaatacaag tttcgccgat gaattgagtc atttgctgac attggtttcc aaatttgaat
2701 ttgtcttttg tttgaaattc ctgtatcgag tgctgagtgt tacaggaatt ctttccaaag
2761 agcttcaaaa taaaaccata gacatttttt ctttgtcttc aaaaatagaa gcaattttgg
2821 aatgtttatc atctgaaaga aatgacgtat actttaaaac aatctgggat ggaacagagg
2881 aaatatgtca aaaaataacc tgtaaaggtt ttaaagttga aaaaccttct cttcagaaaa
2941 gaagaaaaat tcagaaatca gtagatcttg gcaattcaga taatatgttt tttcctactt
3001 caacagaaga acaatataaa attaatatct attaccaagg attagatact atattacaaa
3061 atttaaagtt atgtttttcg gagtttgatt attgcaaaat aaagcaaatt tcagaactgt
3121 tatttaaatg gaatgaacca ttaaatgaaa caacagcaaa acatgttcag gaattttata
3181 aacttgatga ggacattatc ccagaactta gattttatcg acattatgca aagcttaact
3241 ttgtcataga tgatagttgc ataaacttcg tcagtctcgg ctgtttgttt attcagcatg
3301 gtcttcacag taatattcct tgtctctcaa agctattata tattgctttg tcttggccaa
3361 ttacttcagc aagtactgag aactcatttt ctaccctgcc tcgtcttaag acatatttat
3421 gtaataccat gggacaagag aagcttactg gcccagccct aatggctgtt gagcaggagt
3481 tggtaaataa actaatggag cctgaaagac tcaatgaaat tgtggaaaag tttatcagtc
3541 agatgaaaga aatataatac atgctcattt gaacttacct aaaagacttg tatttccatt
3601 gggatgtttt catttcaaaa ttgttcaaaa ttcaaaagac acagaacgat aaacagtgaa
3661 gtctccttcc ctcctttaga actcattttc tcttcccaaa aagtgttatc ttttccttaa
3721 atatccctct agaggtattt ttcctaagtg gtattgtacg gtgtatactg ttcttcagct
3781 tgtcttctct gtgtaacata tttttgagat tgtcccatgt cgttacatga agagtttctt
3841 gattcttggt ctataattgc agatgttatt gtatgaatgt accataatat atttgagcag
3901 tccctgctga catttttttc ctaacctttt gctattataa ataatgattc attttataac
3961 cttttatata ggtcacattg cacatgagtg agttactgta agctggaaat ctaaagttag
4021 aattactagg ttaagatatg tgcattttta cttttgatag atattggcaa gttgccatct
4081 ataaggattg tgccagttta cagtcccacc cacaatgcat gagagtgcct attaaatctt
4141 tgtaagtgtt ataaaaaaaa aaagaaaaaa aaaaaaaaaa a
//