LOCUS BX537535 2721 bp mRNA linear HUM 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686A2112 (from clone DKFZp686A2112).
ACCESSION BX537535
VERSION BX537535.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2721)
AUTHORS Poustka A., Albert R., Moosmayer P., Schupp I., Wellenreuther R.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
JOURNAL Submitted (17-JUN-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by DKFZ (German Cancer Research Center,
Heidelberg/Germany) within the cDNA sequencing consortium of
the German Genome Project.
This clone (DKFZp686A2112) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..2721
/db_xref="H-InvDB:HIT000054320"
/organism="Homo sapiens"
/map="6p22.1"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686A2112"
/tissue_type="human cervix"
/db_xref="taxon:9606"
CDS join(<607..1197,1199..1579)
/codon_start=1
/gene="DKFZp686A2112"
/product="hypothetical protein"
/note="serum response element(SRE)-ZBP"
/note="The frame shift was determined manually"
/db_xref="GOA:Q16670"
/db_xref="H-InvDB:HIT000054320.15"
/db_xref="HGNC:HGNC:12978"
/db_xref="InterPro:IPR003309"
/db_xref="InterPro:IPR013087"
/db_xref="InterPro:IPR036236"
/db_xref="InterPro:IPR038269"
/db_xref="UniProtKB/Swiss-Prot:Q16670"
/protein_id="CAD97775.1"
/translation="PLKGVQEQQVRHECEVTKPEKEKGEETRIENGKLIVVTDSCGRV
ESSGKISEPMEAHNEGSNLERHQAKPKEKIEYKCSEREQRFIQHLDLIEHASTHTGKK
LCESDVCQSSSLTGHKKVLSREKGHQCHECGKAFQRSSHLVRHQKIHLGEKPYQCNEC
GKVFSQNAGLLEHLRIHTGEKPYLCIHCGKNFRRSSHLNRHQRIHSQEEPCECKECGK
TFSQALLLTHHQRIHSHSKSHQCNECGKAFSLTSDLIRHHRIHTGEKPFKCNICQKAF
RLNSHLAQHVRIHNEEKPYQCSECGEAFRQRSGLFQHQRYHHKDKLA"
regulatory 2669..2674
/regulatory_class="polyA_signal_sequence"
polyA_site 2680
BASE COUNT 851 a 567 c 632 g 671 t
ORIGIN
1 tgagagctga cactcggcga tgagctaaga cgctgtttca gagcgtttgg gtcctctgag
61 gccccttgac caggagtgtc tctgaagata cagtccaaag aaagttctcc aaaacaagga
121 gagcagtctg aagctgggga tggcaacagc attggtgagt gcccattccc tggctcccct
181 gagtctgaag aaggaggggc ttcgggtagt gagggaggat cactactcta cttgggaaca
241 gggattcaag ctgcaaggaa acagtaaagg ccttggacag gagccattgt gcaaacaatt
301 caggcagttg cgttatgaag agaccacagg acctcgagaa gcactaagtc ggctccggga
361 gctctgtcaa cagtggctac agcccgagac ccataccaag gagcagatcc tggagctgct
421 ggtgctggag cagtttctga tcatcctgcc taaggagctc caggcccggg tgcaggagca
481 tcacccagag agcagggagg acgtggttgt tgttctggag gatttgcagc tggatcttgg
541 agaaacagga caacaggtgg acccagacca gccaaagaaa caaaaaatac ttgtggagga
601 gatggccctc tgaaaggagt acaggaacag caggttcggc atgagtgtga agttacaaag
661 cctgagaaag agaagggtga ggagacaagg attgagaatg ggaagcttat tgtagtaaca
721 gactcttgtg gaagagtaga gtcatctggg aaaatatctg aacccatgga ggctcataat
781 gagggctcta acttggaaag gcatcaggcc aagcccaaag agaagattga gtataaatgc
841 tcagaacgtg agcagagatt catccagcac ttggacctga ttgaacatgc gagtacacac
901 acgggaaaga aactctgcga gtctgatgtg tgtcagagtt ccagtcttac aggacataag
961 aaagtcctct ctagagagaa aggtcatcag tgtcatgagt gtgggaaagc ctttcagagg
1021 agttcacacc tcgtcagaca tcagaaaatc catcttggtg agaagcctta tcagtgcaat
1081 gagtgtggca aagtctttag ccagaatgca ggccttttgg aacatctcag aattcatact
1141 ggagagaaac cttatctatg tatccattgt ggaaaaaatt ttaggcgcag ctctcactct
1201 taatcgacat cagagaattc acagtcagga ggagccctgt gagtgcaagg agtgtggaaa
1261 aacctttagt caggccttac tcctcaccca ccatcagaga atccatagtc actccaaaag
1321 ccatcaatgt aacgagtgtg gaaaagcttt cagtttgacc tcagacctta ttcgacacca
1381 cagaattcat actggagaaa aacctttcaa gtgtaacata tgccagaaag ccttccgact
1441 aaactcacac cttgctcagc atgtaagaat ccacaatgaa gaaaaaccct atcagtgtag
1501 tgaatgtgga gaagccttca ggcaaaggtc aggtcttttt caacatcaga gatatcacca
1561 caaagacaaa ctggcttgat gaggtgttct ctccttgtag aacatcagag aaggcacatt
1621 gactagcaaa cagcacttta ggaaaagtca ccgtagccca ctgtggcatc agaaaattct
1681 tgggggctga gttggaggct ccctgcctct attctctctc ctttgctttc cttgaagtca
1741 gctttggacc acaataattt cactgtagat gatatgctag gatcaaagtt aaacagcatt
1801 cttcactgca ggacatctca gagcatgtaa cataactgca tgattatata ctctaagcaa
1861 tagagagctt catgactgag taagagtttt gaagtcagca gtgaatcaag tgcccacaga
1921 tttgcaggct taagcagaac aagggaagat tgatattttt ggatatgcta tagcagcttt
1981 ctcctatgaa ataaaactga tgatgtttgg aagtatacta ctctcaaagg tgtctttaaa
2041 gtacaggtta atggtgaaca ttttccccca gtggcttcac ctcattcctc ccactggcct
2101 taccccttcc ttccccagtg gaagcatttt caaaagcaaa gataattttc gctggtgaac
2161 ttcagaactt gccttcaggg ttagcttcat gtaattttac catttcccat ccccattccc
2221 caccacatta tgtcaagatt caagttataa attaacgttt tacttagact ttgaaagaga
2281 tttcatgagt aatttgaatg aaccttgctg aattaatctg aatagcaact gtctgacttg
2341 ataactccag tgccagtata gtggctgctg catagacact attcagtaaa tgtctgatga
2401 aagaaattgg actttttccc tttaatactg atgatgcaat tttgaaatgt tgcttgttct
2461 ggaatacttc ggaagttaaa caataaagtc agcttggaga ggagatcatg atctttatac
2521 tgtgaatagc agaatgtcac agatgaagaa tattaaaatt aggggcgtcc actccaaaac
2581 atatcaccag agtgacaact tcagccctca gcctctgcaa tccatatata tcctggtctt
2641 gggagtccat agaatactgt ttccttctaa taaaggtttc aaacaaaaaa aaaaaaaaaa
2701 aagaaaaaaa aaaaaaaaaa a
//