LOCUS BX537426 1826 bp mRNA linear HUM 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp313I1240 (from clone DKFZp313I1240);
complete cds.
ACCESSION BX537426
VERSION BX537426.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1826)
AUTHORS Bloecker H., Boecher M., Mewes H.W., Weil B., Amid C., Osanger A.,
Fobo G., Han M., Wiemann S.
JOURNAL Submitted (16-JUN-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by GBF (National Research Centre for Biotechnology
Ltd., Braunschweig/Germany) within the cDNA sequencing
consortium of the German Genome Project.
This clone (DKFZp313I1240) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..1826
/db_xref="H-InvDB:HIT000054241"
/organism="Homo sapiens"
/map="11q12.3"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="313 (synonym: hlcc2). Vector pTriplEx2; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp313I1240"
/tissue_type="human heart"
/db_xref="taxon:9606"
CDS 156..1223
/codon_start=1
/gene="DKFZp313I1240"
/product="hypothetical protein"
/note="syntaxin 5"
/db_xref="GOA:Q13190"
/db_xref="H-InvDB:HIT000054241.14"
/db_xref="HGNC:HGNC:11440"
/db_xref="InterPro:IPR000727"
/db_xref="InterPro:IPR006012"
/db_xref="InterPro:IPR010989"
/db_xref="InterPro:IPR021538"
/db_xref="PDB:3EFO"
/db_xref="UniProtKB/Swiss-Prot:Q13190"
/protein_id="CAD97668.1"
/translation="MIPRKRYGSKNTDQGVYLGLSKTQVLSPATAGSSSSDIAPLPPP
VTLVPPPPDTMSCRDRTQEFLSACKSLQTRQNGIQTNKPALRAVRQRSEFTLMAKRIG
KDLSNTFAKLEKLTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVRAK
GSQSGRHLQTHSNTIVVSLQSKLASMSNDFKSVLEVRTENLKQQRSRREQFSRAPVSA
LPLAPNHLGGGAVVLGAESHASKDVAIDMMDSRTSQQLQLIDEQDSYIQSRADTMQNI
ESTIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLDVEAAHSEILKYFQSVTSNRW
LMIKIFLILIVFFIIFVVFLA"
polyA_site 1794
BASE COUNT 433 a 521 c 483 g 389 t
ORIGIN
1 ggggggtggg gttacgtgta ggtgacgtgg ccgcttccag tctttggtcg ggtttcggcg
61 gcttcagtgc tcggggagga ggcagtgacg gccggtgaga ttggaagtgg cggcggcggc
121 aggcggcaga ggggagtccg aggttatgcg tctcaatgat cccgcggaaa cgctacgggt
181 ctaagaacac ggatcagggt gtctacctgg gtctctcaaa gacacaggtc ctgtcccctg
241 caactgctgg cagtagcagc agcgacatcg cccctctgcc ccccccagtg accctcgtcc
301 ctccccctcc cgacaccatg tcctgccggg atcggaccca ggagtttctg tctgcctgca
361 agtcgctgca gacccgtcag aatggaatcc agacaaataa gccagctttg cgtgctgtcc
421 gacaacgcag tgaattcacc ctcatggcca agcgcattgg gaaagacctt agcaacacat
481 ttgccaagct ggagaagctg acaatcttgg caaagcgcaa gtccctcttt gatgataaag
541 cagtggaaat tgaagagcta acatatatca tcaaacagga catcaatagc ctcaacaaac
601 aaattgctca gctccaggat ttcgtgagag ccaagggcag ccagagtggc cggcacctgc
661 agacccactc caacaccatt gtggtctcct tgcagtcgaa actggcttct atgtccaatg
721 acttcaaatc ggttttagaa gtgaggacag agaacctgaa gcagcagagg agccggagag
781 agcagttctc ccgggcacct gtgtcagccc tgccccttgc ccctaaccac ctgggcggtg
841 gtgctgtggt tctgggggca gagtcccatg cctccaagga tgtcgccatc gacatgatgg
901 actctcggac cagccagcag ctgcagctca ttgacgagca ggattcctac atccagagtc
961 gggcagacac catgcagaac attgagtcga caattgttga gttgggctcc atctttcagc
1021 agttggcaca catggttaag gaacaggagg aaaccattca gaggatcgac gagaacgtgc
1081 taggagccca gctggacgtt gaggccgccc attcagagat cctcaagtac ttccagtctg
1141 tcacctccaa ccggtggctc atgatcaaaa tcttcctcat cctcattgtc ttcttcatca
1201 tctttgtggt cttccttgct tgaaccctct ctactctgag gcactctgtt ggggtttggg
1261 accctcctgg gaaggcaagt ggccagtgct gccactgagc ctgtgcaggg tacttgggag
1321 aaaggccctg tttccctgga actgctaaga atgaccactg cccctgatcc cccacccctt
1381 gcctctggcc accctgtcct ccccccacca ccctcaggcc tatgaaacac acagggttct
1441 agatttgaac tctgctgtga agtgactgga agggagcaga ggccagctgg gggccagtgg
1501 gggaggttgt ttccactagg agatttttat aaaccctctc cagcctctcc caaaggaagc
1561 gttggcagca aagggagatg atgcccttac ccaccttcct gtgagtgaag agaggaagca
1621 gccccaggga ccaattttcc caattgacct ctttcttcct ctttcaccat gtgaggcagg
1681 gagccctgag cccttcagct gcctgcacaa cccctgacat tggctgctgg tgactcaatc
1741 tgccaaatgt gctgcagctc gttttctccc aattacagca agactgtcag ccccaaaaaa
1801 aaaaaaaaaa aaaaaaaaaa aaaaca
//