LOCUS BX537425 6480 bp mRNA linear HUM 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686A179 (from clone DKFZp686A179);
complete cds.
ACCESSION BX537425
VERSION BX537425.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6480)
AUTHORS Ansorge W., Krieger S., Regiert T., Rittmueller C., Schwager B.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
JOURNAL Submitted (16-JUN-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by EMBL (European Molecular Biology Laboratories,
Heidelberg/Germany) within the cDNA sequencing consortium of
the German Genome Project.
This clone (DKFZp686A179) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..6480
/db_xref="H-InvDB:HIT000054240"
/organism="Homo sapiens"
/map="2p13.2"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686A179"
/tissue_type="human cervix"
/db_xref="taxon:9606"
CDS 288..6224
/codon_start=1
/gene="DKFZp686A179"
/product="hypothetical protein"
/note="nuclear protein, NP220"
/db_xref="GOA:Q14966"
/db_xref="H-InvDB:HIT000054240.15"
/db_xref="HGNC:HGNC:17894"
/db_xref="InterPro:IPR000504"
/db_xref="InterPro:IPR000690"
/db_xref="InterPro:IPR003604"
/db_xref="InterPro:IPR012677"
/db_xref="InterPro:IPR013087"
/db_xref="InterPro:IPR022755"
/db_xref="InterPro:IPR033096"
/db_xref="InterPro:IPR035979"
/db_xref="InterPro:IPR036236"
/db_xref="UniProtKB/Swiss-Prot:Q14966"
/protein_id="CAD97667.1"
/translation="MSRPRFNPRGDFPLQRPRAPNPSGMRPPGPFMRPGSMGLPRFYP
AGRARGIPHRFAGHESYQNMGPQRMNVQVTQHRTDPRLTKEKLDFHEAQQKKGKPHGS
RWDDEPHISASVAVKQSSVTQVTEQSPKVQSRYTKESASSILASFGLSNEDLEELSRY
PDEQLTPENMPLILRDIRMRKMGRRLPNLPSQSRNKETLGSEAVSSNVIDYGHASKYG
YTEDPLEVRIYDPEIPTDEVENEFQSQQNISASVPNPNVICNSIFPVEDVFRQMDFPG
ESSNNRSFFSVESGTKMSGLHISGGQSVLEPIKSVNQSINQTVSQTMSQSLIPPSMNQ
QPFSSELISSVSQQERIPHEPVINSSNVHVGSRGSKKNYQSQADIPIRSPFGIVKASW
LPKFSHADAQKMKRLPTPSMMNDYYAASPRIFPHLCSLCNVECSHLKDWIQHQNTSTH
IESCRQLRQQYPDWNPEILPSRRNEGNRKENETPRRRSHSPSPRRSRRSSSSHRFRRS
RSPMHYMYRPRSRSPRICHRFISRYRSRSRSRSPYRIRNPFRGSPKCFRSVSPERMSR
RSVRSSDRKKALEDVVQRSGHGTEFNKQKHLEAADKGHSPAQKPKTSSGTKPSVKPTS
ATKSDSNLGGHSIRCKSKNLEDDTLSECKQVSDKAVSLQRKLRKEQSLHYGSVLLITE
LPEDGCTEEDVRKLFQPFGKVNDVLIVPYRKEAYLEMEFKEAITAIMKYIETTPLTIK
GKSVKICVPGKKKAQNKEVKKKTLESKKVSASTLKRDADASKAVEIVTSTSAAKTGQA
KASVAKVNKSTGKSASSVKSVVTVAVKGNKASIKTAKSGGKKSLEAKKTGNVKNKDSN
KPVTIPENSEIKTSIEVKATENCAKEAISDAALEATENEPLNKETEEMCVMLVSNLPN
KGYSVEEVYDLAKPFGGLKDILILSSHKKAYIEINRKAAESMVKFYTCFPVLMDGNQL
SISMDPENMNIKDEEAIFITLVKENDPEANIDTIYDRFVHLDNLPEDGLQCVLCVGLQ
FGKVDHHVFISNRNKAILQLDSPESAQSMYSFLKQNPQNIGDHMLTCSLSPKIDLPEV
QIEHDPELEKESPGLKNSPIDESEVQTATDSPSVKPNELEEESTPSIQTETLVQQEEP
CEEEAEKATCDSDFAVETLELETQGEEVKEEIPLVASASVSIEQFTENAEECALNQQM
LNSDLEKKGAEIINPKTALLPSDSVFAEERNLKGILEEPPSEAEDFISGITQTMVEAV
AEVEKNETVSEILPSTCIVTLVPGIPTGDEKTVDKKNISEKKGNMDEKEEKEFNTKET
RMDLQIGTEKAEKNEGRMDAEKVEKMAAMKEKPAENTLFKAYPNKGVGQANKPDETSK
TSILAVSDVSSSKPSIKAVIVSSPKTKATVSKTENQKSFPKSVPRDQINAEKKLSAKE
FGLLKPTSARSGLAESSSKFKPTQSSLTRGGSGRISALQGKLSKLDYRDITKQSQETE
ARPSIMKRDDSNNKTLAEQNTKNPKSTTGRSSKSKEEPLFPFNLDEFVTVDEVIEEVN
PSQAKQNPLKGKRKETLKNVPFSELNLKKKKGKTSTPRGVEGELSFVTLDEIGEEEDA
AAHLAQALVTVDEVIDEEELNMEEMVKNSNSLFTLDELIDQDDCISHSEPKDVTVLSV
AEEQDLLKQERLVTVDEIGEVEELPLNESADITFATLNTKGNEGDTVRDSIGFISSQV
PEDPSTLVTVDEIQDDSSDLHLVTLDEVTEEDEDSLADFNNLKEELNFVTVDEVGEEE
DGDNDLKVELAQSKNDHPTDKKGNRKKRAVDTKKTKLESLSQVGPVNENVMEEDLKTM
IERHLTAKTPTKRVRIGKTLPSEKAVVTEPAKGEEAFQMSEVDEESGLKDSEPERKRK
KTEDSSSGKSVASDVPEELDFLVPKAGFFCPICSLFYSGEKAMTNHCKSTRHKQNTEK
FMAKQRKEKEQNEAEERSSR"
BASE COUNT 2266 a 1160 c 1404 g 1650 t
ORIGIN
1 gggaggcggt agctttttcg gcgtcgagac tggaggctga gtgctaaact gtgtggggcg
61 cggatggggt ccagctgtta gtcggctttg tgttattctt ggaaaatttc gcaccacttg
121 tgaattcctt gaacctgggc attgcaaacc cacttctgtt gggcccatct cctttgcact
181 ttgctcagat taagactcag ttggcgcttc agcagctgaa tgccgttgcc tcacatggtt
241 caacaccacc ttatacttta ttaaatcagg ctttcttgaa aatagccatg tcgagaccca
301 ggtttaatcc tcgaggagac tttccacttc aaaggccacg agcacctaac ccttctggga
361 tgaggcctcc aggaccattt atgaggcctg gatctatggg tctcccaaga ttttacccag
421 cagggagagc acgtggaatt ccacacagat ttgctggcca tgaatcttat cagaacatgg
481 ggccacagag aatgaatgtt caggtaactc aacacagaac tgatccaaga ttgaccaaag
541 aaaaactgga ttttcatgaa gcacaacaga agaaggggaa gcctcatggt agccggtggg
601 atgatgagcc tcatatatct gcatcagtgg cagtgaaaca gagttctgta acacaggtta
661 cagagcagag tcccaaagta cagagccgct atacaaaaga gagtgcctca agtatcttag
721 caagttttgg attatctaat gaagacctag aagaacttag tcgctatcct gatgaacaac
781 taactcctga aaatatgcca ttaattttga gggatataag aatgcgaaaa atggggcgcc
841 gattacctaa tttaccttct cagagcagaa ataaagaaac acttggtagt gaagcagttt
901 caagtaatgt gatcgattat gggcatgcaa gcaaatatgg ctacacagaa gatccacttg
961 aagtacgtat ttatgatcct gaaattccaa ctgatgaggt cgagaatgaa tttcagtcac
1021 agcagaacat ttctgcatct gttcccaatc caaatgtgat atgtaattct atttttcctg
1081 ttgaagacgt atttcgccaa atggacttcc ccggtgagtc ctccaataat cggtcctttt
1141 tctcagttga gagtggaacc aagatgtcag gcttacacat ttcaggagga cagtcagtcc
1201 ttgaacccat aaaatccgtc aaccaatcca ttaaccaaac agttagccag acaatgagtc
1261 aatctctgat tcctccatct atgaaccagc aacctttttc gtcggaatta atttcatctg
1321 taagccagca agagcggatc ccacatgaac ctgtgattaa ttcatctaac gtacatgttg
1381 gatcaagagg aagtaaaaag aattaccagt cacaggctga cattcccatt cggtctccct
1441 ttggtattgt gaaagcatcc tggctaccaa agttttcaca tgctgatgcc cagaagatga
1501 agagacttcc aactccttct atgatgaatg attattatgc agcatctcca agaatatttc
1561 cacatttgtg ttctctgtgt aacgtagaat gtagtcattt gaaggattgg attcagcatc
1621 aaaatacatc tactcatatt gagagctgtc gacagttacg tcaacagtat cctgattgga
1681 atcctgagat cctcccatcg agaagaaatg agggcaatag aaaagaaaat gaaactccac
1741 gaagacgttc tcattccccc agtcctaggc gttctagaag atcaagctca agtcacagat
1801 tccgtcggtc tcgaagccca atgcattaca tgtataggcc gagaagtcga agtccaagaa
1861 tttgccatcg tttcatttct agatacagat ccagatccag atcccgttca ccatatcgaa
1921 ttagaaatcc atttagaggt agtccaaaat gctttcgatc agttagccct gagaggatgt
1981 caaggagatc agtgagatca tcagatagaa aaaaagcatt agaagatgta gtacaacgat
2041 ctgggcatgg gacagaattt aataaacaga agcatcttga agctgctgat aagggacatt
2101 caccagcaca aaagcctaaa actagcagtg gaacaaaacc atcagttaaa cctacaagcg
2161 ctacaaagag tgattcaaat ctaggaggac attctattcg ttgtaaatca aagaatcttg
2221 aagatgacac tttgtcagaa tgtaaacagg tgtctgataa agctgtttct ctccagcgaa
2281 agcttcggaa agaacagtca ttgcattatg gttcggttct tcttataact gaattaccag
2341 aggatggttg tactgaagaa gatgtgagaa aattatttca accatttggg aaagtgaatg
2401 atgtcctaat tgttccatat agaaaagagg cttacctaga aatggaattt aaagaggcaa
2461 ttactgcaat tatgaagtac attgaaacaa cacctcttac gataaaagga aaaagtgtga
2521 aaatatgtgt tccaggaaag aaaaaagcac agaacaaaga ggtgaagaaa aagactttag
2581 agtcaaagaa agtatctgca tctaccttaa aaagagatgc agatgcttca aaagctgttg
2641 aaattgttac ttcaacttct gctgccaaaa ctggacaagc caaggcatct gtagccaaag
2701 taaacaaatc tacagggaaa tcagcaagtt ctgtaaaatc tgtggtaacg gtagctgtta
2761 aaggtaataa agcttcaatc aaaacagcaa aatctggtgg aaagaagtct ctagaagcca
2821 aaaagactgg gaatgtcaaa aacaaagact ctaacaaacc tgtgactata ccagaaaact
2881 ctgaaataaa gaccagtatt gaagtcaaag ccactgaaaa ctgtgctaaa gaagctattt
2941 ctgatgctgc tttggaggcc acagagaatg aaccacttaa caaggaaaca gaagaaatgt
3001 gtgtgatgct tgtctctaat ttgcctaata aaggatattc tgtagaagaa gtttatgact
3061 tagcaaaacc atttggtggt ttaaaggata tcttgatttt atcatctcat aaaaaggcat
3121 atatagaaat aaatagaaaa gctgctgagt ctatggtaaa attttatacc tgcttcccag
3181 tattgatgga tggaaatcaa ctctcaataa gtatggatcc tgaaaacatg aatataaaag
3241 atgaggaagc tatatttata accttggtaa aagaaaatga cccagaggca aacatagata
3301 caatctatga tcgatttgta catcttgata atttaccgga agatggactt cagtgtgtac
3361 tttgtgttgg acttcagttt ggaaaagtgg atcaccatgt attcataagt aatagaaata
3421 aggcaattct tcagttagat agtcctgaat ctgctcagtc aatgtatagc tttctgaaac
3481 aaaatccaca aaatattggt gaccatatgt tgacctgctc attatctcca aagatagact
3541 taccagaggt gcaaattgag catgacccag aattagaaaa agaaagccct ggcttgaaaa
3601 acagtccaat tgatgaaagt gaggtgcaaa cagcaactga tagtccctct gttaaaccta
3661 atgagcttga agaagaaagt actcccagca ttcaaacaga aactttggta cagcaggaag
3721 agccttgtga ggaagaagct gaaaaagcaa catgtgattc tgactttgct gttgaaactt
3781 tggagcttga aactcaagga gaggaggtca aagaagaaat tcctcttgta gcatccgctt
3841 cagtcagtat tgaacaattc actgaaaatg ccgaggagtg tgctttaaat cagcagatgc
3901 ttaacagtga cttggagaag aaaggggcag aaattattaa ccctaaaaca gcattgttac
3961 catctgacag tgtgtttgca gaagaaagga acctcaaagg aattctagaa gaacctccat
4021 ctgaagcaga agatttcatt tctggaatta cacagactat ggtagaagct gtagctgaag
4081 tagaaaaaaa tgaaactgtt tcggaaatat tgccatcaac ttgtattgtg acgttagtac
4141 caggaattcc cactggggat gagaagacag tggacaaaaa gaatatttct gaaaaaaaag
4201 gtaacatgga tgaaaaggag gagaaggaat ttaatactaa ggaaaccaga atggatcttc
4261 aaataggaac agagaaggct gaaaagaatg aaggtaggat ggatgcagaa aaggtggaaa
4321 agatggcagc aatgaaagaa aagcctgcag aaaacacttt attcaaggca tacccaaata
4381 aaggagtggg tcaggctaat aagcctgatg aaactagtaa aactagtatt ctggctgtat
4441 cagatgtatc tagcagtaaa ccaagcatca aggctgttat agtctcttct cctaagacaa
4501 aagctacggt ttcaaaaact gaaaatcaga aaagttttcc aaaatctgtg cccagagatc
4561 aaataaatgc tgaaaagaaa ctttcagcca aggaatttgg tctgcttaaa cccacaagtg
4621 ccaggtcagg cttggcagaa agcagcagta aattcaaacc tactcagagc agtcttacca
4681 gaggaggcag tggaaggatc tcagccctgc aaggcaagct ttctaaactg gattacagag
4741 atataacaaa acaatctcag gaaacagagg ctagaccttc catcatgaaa cgggatgaca
4801 gcaacaataa gactttggct gagcaaaaca ctaagaatcc taaaagcact actggtagaa
4861 gttccaaatc taaagaggag ccattatttc catttaattt ggatgaattt gttactgtgg
4921 atgaggttat agaagaagtg aatccttctc aggccaagca gaatccacta aagggaaaaa
4981 ggaaagaaac tctcaaaaat gttcctttct ctgaacttaa cttaaagaag aaaaagggga
5041 aaacttccac tcctcgtggt gttgagggag aactatcttt tgtgacattg gatgagattg
5101 gggaagagga agatgcagct gcacatctag cacaagctct agtcactgtg gatgaagtaa
5161 ttgatgaaga agaactaaat atggaagaaa tggtaaaaaa ttcaaattca ctttttacat
5221 tagatgaatt aattgaccaa gatgattgca tttcccacag tgaacctaaa gatgttactg
5281 ttctgtcagt ggctgaagaa caagatctcc tcaaacagga acgcttggta actgtggatg
5341 aaattggaga agtggaagag ctacctttga atgagtcagc agacataact tttgccactt
5401 taaatactaa aggaaatgaa ggagatactg taagggattc cattggcttc atttcttctc
5461 aggtgcccga agacccttct actttagtta ctgtagatga aatacaagat gacagcagtg
5521 atttgcattt agtgactttg gatgaagtaa ctgaagagga tgaagactct ctggcggatt
5581 ttaacaacct taaagaagag cttaattttg ttactgttga tgaagttgga gaggaggaag
5641 atggagataa tgatttaaaa gttgagttag cacaaagcaa aaatgaccat cccacagata
5701 aaaaagggaa tagaaagaag agagctgtgg acacaaaaaa gacaaaactt gaatccttgt
5761 cccaagtggg tccagtaaat gagaatgtta tggaagaaga tctaaaaacc atgattgaaa
5821 gacacttaac agctaaaact ccaaccaaga gagttagaat tgggaaaact ctgccatcag
5881 aaaaagctgt tgtgacagaa ccagcaaaag gtgaagaggc cttccagatg agtgaagttg
5941 atgaggaatc tggattaaag gattcagaac cagagcgaaa acgcaagaag actgaagact
6001 cttcttcagg caaatcagtg gcgtctgatg tccctgagga attagacttt cttgtaccta
6061 aggctggatt cttctgtcca atttgttccc tcttctactc aggtgaaaaa gcaatgacaa
6121 atcactgcaa gagtacacgt cataagcaaa atactgagaa attcatggcc aagcaaagaa
6181 aggaaaagga gcagaatgag gctgaagaaa gaagctctag gtgattgggg gaaaggaaag
6241 aattcactag aaatttgttt agggtccagt tgatttgtgt atttttgtta tcatttaatt
6301 tgtaattttc gtttcagaag caaatattcg tgttgtacaa atttctgatt gccctaaatg
6361 tagagagact gatggggaaa gtatgatggg tttgattttt atatcaaatc atcaggcatg
6421 gagaaatatc ttttagaagt gttaaaataa atgttcctac tgtatatttt atataaaaaa
//