LOCUS BX537412 2582 bp mRNA linear HUM 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686O1459 (from clone DKFZp686O1459);
complete cds.
ACCESSION BX537412
VERSION BX537412.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2582)
AUTHORS Poustka A., Albert R., Moosmayer P., Schupp I., Wellenreuther R.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
JOURNAL Submitted (16-JUN-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by DKFZ (German Cancer Research Center,
Heidelberg/Germany) within the cDNA sequencing consortium of
the German Genome Project.
This clone (DKFZp686O1459) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..2582
/db_xref="H-InvDB:HIT000054227"
/organism="Homo sapiens"
/map="2q31.1"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686O1459"
/tissue_type="human endometrium"
/db_xref="taxon:9606"
CDS 169..2007
/codon_start=1
/gene="DKFZp686O1459"
/product="hypothetical protein"
/note="cytoplasmic dynein intermediate chain 2C"
/db_xref="GOA:Q13409"
/db_xref="H-InvDB:HIT000054227.15"
/db_xref="HGNC:HGNC:2964"
/db_xref="InterPro:IPR001680"
/db_xref="InterPro:IPR015943"
/db_xref="InterPro:IPR017986"
/db_xref="InterPro:IPR025956"
/db_xref="InterPro:IPR036322"
/db_xref="PDB:5JPW"
/db_xref="PDB:6F1T"
/db_xref="PDB:6F1U"
/db_xref="PDB:6F1Z"
/db_xref="PDB:6F38"
/db_xref="PDB:6F3A"
/db_xref="UniProtKB/Swiss-Prot:Q13409"
/protein_id="CAD97654.1"
/translation="MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETDQKKEAV
APVQEESDLEKKRREAEALLQSMGLTPESPIVPPPMSPSSKSVSTPSEAGSQDSGDGA
VGSRRGPIKLGMAKITQVDFPPREIVTYTKETQTPVMAQPKEDEEEDDDVVAPKPPIE
PEEEKTLKKDEENDSKAPPHELTEEEKQQILHSEEFLSFFDHSTRIVERALSEQINIF
FDYSGRDLEDKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNN
EDAPHEPDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLW
DNRSNKRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHP
QDSMELVHKQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQ
GPITGIHCHAAVGAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNADYVYDVMWSP
THPALFACVDGMGRLDLWNLNNDTEVPTASISVEGNPALNRVRWTHSGREIAVGDSEG
QIVIYDVGEQIAVPRNDEWARFGRTLAEINANRADAEEEAATRIPA"
regulatory 2508..2513
/regulatory_class="polyA_signal_sequence"
polyA_site 2527
BASE COUNT 821 a 475 c 573 g 713 t
ORIGIN
1 gttctcgatc gtgtcagttt gtaaggcgag ggcggaagtt ggattcctgg cctgagaata
61 ttaggcgtag ttttccagtt tttggcaaag cggaaatact taaggcccct gggttgactg
121 ggttctttgt tttatctacc ggcttctgct ttacgacagg tcacaaacat gtcagacaaa
181 agtgaattaa aggctgagtt ggaacgtaag aagcagcgac tggcccaaat cagagaggaa
241 aagaagagaa aagaagaaga aaggaaaaaa aaagaaacag accagaagaa ggaagctgtt
301 gctcctgtgc aagaagaatc agatcttgaa aaaaaaagga gagaagctga agcattgctt
361 caaagcatgg ggctaactcc agaatccccc attgtccctc ctcctatgtc tccatcctcc
421 aaatctgtga gcactccaag tgaagctgga agccaagact ctggagatgg cgccgtggga
481 tctagacgag gacctattaa acttggaatg gctaaaatca cgcaagtcga ctttcctcct
541 cgagaaattg tcacgtatac aaaggaaact cagactccag ttatggctca acccaaagaa
601 gatgaagagg aagatgatga tgtagtggct cctaaaccac ctattgaacc tgaagaagag
661 aaaactttaa agaaagatga ggaaaatgat agtaaagctc cccctcatga gctgactgaa
721 gaagaaaagc aacaaatctt gcactctgag gaatttttaa gtttctttga ccattctaca
781 agaattgtag aaagagctct ttctgagcag attaacatct tctttgacta cagtgggaga
841 gatttggaag acaaagaagg agagattcaa gcaggtgcta aactgtcatt aaatcgacaa
901 ttttttgacg aacgttggtc aaagcatcgg gtggttagtt gtttggattg gtcatctcag
961 tatccggagt tactcgtggc ttcctataac aacaatgaag atgcccctca tgagcctgat
1021 ggtgtggccc ttgtatggaa tatgaaatac aaaaaaacta ccccagagta tgtgtttcac
1081 tgccagtcag ctgtgatgtc tgccacattt gcaaaatttc atccaaatct tgttgttggt
1141 ggtacatatt caggccaaat tgtgctttgg gataaccgta gcaataaaag aactccagtg
1201 caaagaactc cactgtcagc agctgcacac acacaccctg tatattgtgt aaatgttgtt
1261 ggaacacaaa atgctcacaa tctgattagc atctctactg atggaaaaat ttgttcatgg
1321 agtctggaca tgctttccca tccacaggat agcatggagt tggttcataa acagtcaaaa
1381 gcagtagctg tgacatctat gtccttccct gttggagatg tcaacaactt tgttgttggg
1441 agtgaagaag gttctgtgta cacagcatgc cgccatggca gcaaagctgg aatcagtgag
1501 atgtttgagg ggcatcaagg accaatcact ggcatccatt gtcatgcagc tgttggagca
1561 gtagacttct cacatctttt tgtcacttca tcgtttgact ggacagtaaa gctttggaca
1621 actaagaata acaagccttt gtattcattt gaagataatg cagactatgt ttatgatgtt
1681 atgtggtcac ctacccaccc agccctgttt gcctgtgtgg atggcatggg gagattggat
1741 ttgtggaatc tcaataatga cacagaggta ccaactgcca gcatttctgt ggagggtaat
1801 cctgctctta atcgtgtgag atggacccat tctggcagag agattgctgt gggtgattct
1861 gaaggacaga ttgttatata cgatgtggga gagcagattg ctgttccccg caatgatgaa
1921 tgggcacggt ttggccgaac acttgcagaa attaatgcaa accgagctga tgcagaggag
1981 gaagcagcta cccgaatacc tgcttagttc ctgaaaaggg gagtgtaact agtggatttg
2041 ggaaaggttc ttaagtagat cctgagacta tttgcatgct tctgtctaaa tgataattaa
2101 aaggaaattt catggattaa accatgggtt taatgcagca aggaaaccta caatgtccct
2161 ttatatataa catgcatctt gttttggatt tgtgtcattt tttaatatag ctgattgact
2221 tcacagaaag cagctttttt gaattctaat acataggtgt atatttggta ttagttattt
2281 tgagttcttt tcaacttata acactgtata cagttatttc taaagcacag atgaaataag
2341 ttctgcatat ttttaaataa tcacagttcc ctgttataca gataatgttc tcactaccca
2401 taatatgtag gagcattgtt tctccttagc cgtagtatgc atacacctat ccatgttcat
2461 tctgacatcc tttgttgtct ttataattca tgtggtagtt acctataaat aaaaacaaat
2521 atgcgttaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaacaaaaa aaaaaaaaaa
2581 aa
//