LOCUS BX537405 4615 bp mRNA linear HUM 16-JUN-2003
DEFINITION Homo sapiens mRNA; cDNA DKFZp686A1752 (from clone DKFZp686A1752).
ACCESSION BX537405
VERSION BX537405.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4615)
AUTHORS Poustka A., Albert R., Moosmayer P., Schupp I., Wellenreuther R.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
JOURNAL Submitted (16-JUN-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by DKFZ (German Cancer Research Center,
Heidelberg/Germany) within the cDNA sequencing consortium of
the German Genome Project.
This clone (DKFZp686A1752) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..4615
/db_xref="H-InvDB:HIT000054220"
/organism="Homo sapiens"
/map="9p24.1"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686A1752"
/tissue_type="human endometrium"
/db_xref="taxon:9606"
CDS <1..3330
/codon_start=1
/gene="DKFZp686A1752"
/product="hypothetical protein"
/note="Ran-GTP binding protein, N-terminus truncated"
/db_xref="GOA:O60518"
/db_xref="H-InvDB:HIT000054220.15"
/db_xref="HGNC:HGNC:9851"
/db_xref="InterPro:IPR000357"
/db_xref="InterPro:IPR016024"
/db_xref="InterPro:IPR040122"
/db_xref="InterPro:IPR041389"
/db_xref="InterPro:IPR041653"
/db_xref="UniProtKB/Swiss-Prot:O60518"
/protein_id="CAD97647.1"
/translation="GQSAMAATASAGVPATVSEKQEFYQLLKNLINPSCMVRRQAEEI
YENIPGLCKTTFLLDAVRNRRAGYEVRQMAAALLRRLLSSGFEEVYPNLPADVQRDVK
IELILAVKLETHASMRKKLCDIFAVLARNLIDEDGTNHWPEGLKFLIDSIYSKNVVLW
EVALHVFWHFPGIFGTQERHDLDIIKRLLDQCIQDQEHPAIRTLSARAAAAFVLANEN
NIALFKDFADLLPGILQAVNDSCYQDDDSVLESLVEIADTVPKYLGPYLEDTLQLSLK
LCGDSRLSNLQRQLALEVIVTLSETATPMLKKHTNIIAQAVPHILAMMVDLQDDEDWV
NADEMEEDDFDSNAVAAESALDRLACGLGGKVVLPMTKEHIMQMLQSPDWKYRHAGLM
ALSAIGEGCHQQMESILDETVNSVLLFLQDPHPRVRAAACTTLGQMATDFAPNFQKKF
HETVIAALLRTMENQGNQRVQSHAASALIIFIEDCPKSLLVLYVDSMVKNLHSVLVIK
LQELIRNGTKLALEQLVTTIASVADTIEEKFVPYYDIFMPSLKHIVELAVQKELKLLR
GKTIECISHIGLAVGKEKFMQDASNVMQLLLKTQSDLNNMEDDDPQTSYMVSAWARMC
KILGKDFQQYLPLVIEPLIKTASAKPDVALLDTQDVENMSDDDGWQFVNLGDQQSFGI
KTSGLEAKATACQMLVYYAKELREGFVEYTEQVVKLMVPLLKFYFHDNVRVAAAESMP
FLLECARIRGPEYLAQMWQFICDPLIKAIGTEPDTDVLSEIMNSFAKSIEVMGDGCLN
DEHLEELGGILKAKLEGHFKNQELRQVKRQEENYDQQVEMSLQDEDECDVYILTKVSD
ILHSLFSTYKEKILPWFEQLLPLIVNLICSSRPWPDRQWGLCIFDDIIEHCSPTSFKY
VEYFRWPMLLNMRDNNPEVRQAAAYGLGVMAQFGGDDYRSLCSEAVPLLVKVIKCANS
KTKKNVIATENCISAIGKILKFKPNCVNVDEVLPHWLSWLPLHEDKEEAIQTLSFLCD
LIESNHPVVIGPNNSNLPKIISIIAEGKINETINYEDPCAKRLANVVRQVQTSEDLWL
ECVSQLDDEQQEALQELLNFA"
regulatory 4560..4565
/regulatory_class="polyA_signal_sequence"
polyA_site 4594
BASE COUNT 1417 a 778 c 1015 g 1405 t
ORIGIN
1 ggacagagcg caatggcggc aaccgcgtct gcaggggtgc cggcgaccgt gtcagaaaag
61 caagagtttt accagcttct gaagaacctg atcaatccaa gctgtatggt gcggaggcaa
121 gcagaggaaa tctatgaaaa tatcccaggt ctgtgtaaga ctaccttcct cttagatgcc
181 gtcagaaata gaagagcagg ttatgaggtg agacaaatgg ctgccgcact gctacgacgg
241 cttttgtcct ctgggtttga ggaggtttat ccaaatctgc ctgctgatgt tcagagagat
301 gtcaagattg aactgattct ggctgttaag ttagaaacac atgctagcat gaggaaaaaa
361 ctttgtgata tttttgcagt gctggccagg aatttgatag atgaggatgg cactaaccac
421 tggccggaag gtctgaagtt tcttattgat tcaatctact ccaaaaatgt ggttctatgg
481 gaagttgcac ttcacgtttt ctggcacttt cctgggattt ttgggactca agagcggcat
541 gatttggata tcatcaaacg gttgttggac cagtgtattc aagatcaaga acatccagca
601 atcaggacat tatccgctag agctgcagct gcatttgtac ttgctaatga gaataatatt
661 gctcttttca aagactttgc agacttgctt cctggaatct tacaggctgt gaatgactca
721 tgctaccagg atgatgattc agtgctagaa tcccttgttg agattgcaga taccgtacct
781 aagtacttgg gtccttattt agaagatact ctacagttga gtttgaagtt atgtggagac
841 tctaggctta gtaatctgca gcgccagctg gccctcgaag ttatagtgac cttgtctgaa
901 actgccactc cgatgttgaa aaaacataca aatattattg cacaggcagt tcctcatata
961 ttagcaatga tggttgatct acaagatgat gaggactggg taaatgctga tgaaatggaa
1021 gaagatgatt ttgacagcaa tgcagttgct gcggagagtg cactagacag actggcttgt
1081 gggcttggtg gaaaagttgt tttaccaatg accaaggagc atatcatgca gatgcttcag
1141 agccctgact ggaagtatcg acatgctgga ttaatggcct tatctgccat tggagaagga
1201 tgccatcaac aaatggaatc aattctagat gaaacagtta actccgtttt gctttttctt
1261 caggatcctc atccaagggt gagggctgca gcctgtacta cacttggaca gatggctaca
1321 gattttgcac ctaatttcca aaagaaattt catgaaacag tgattgcagc tctgttacgt
1381 accatggaaa atcaaggtaa tcagcgtgtg caatcacatg cagcttctgc tcttattatt
1441 tttattgaag actgccctaa atcattgcta gttctatatg tggatagtat ggtgaaaaat
1501 ctacattccg tcttggtgat taaacttcaa gagttgattc ggaatggaac taagttggct
1561 ttggaacaac ttgtgacaac cattgcatca gttgcagata caatagaaga aaaatttgtc
1621 ccatattatg atatattcat gccctcacta aagcacattg ttgagcttgc tgttcagaag
1681 gaactcaagc ttctgagagg aaaaactatc gagtgcatta gccatattgg tcttgctgtt
1741 gggaaggaaa aatttatgca agatgcatca aatgtgatgc agctgttgtt gaagacacaa
1801 tcagacttaa ataatatgga agatgatgac cctcagacct cttacatggt ttcagcatgg
1861 gctagaatgt gtaaaattct tggaaaagat tttcaacagt accttccact ggttatcgag
1921 cctcttatta agactgcttc agccaaacct gatgttgctc tcttagacac acaggatgtg
1981 gaaaatatga gtgacgatga tggctggcaa tttgtaaatc ttggagacca gcagagtttt
2041 ggaattaaaa cttcaggact tgaagcaaaa gcaactgctt gccaaatgtt ggtttactat
2101 gctaaggagt taagggaagg gtttgtggaa tatacagaac aagttgtgaa gctgatggtt
2161 cctttactga aattttattt ccatgacaat gttcgagtgg cagcagcaga gtccatgcct
2221 tttctcctgg aatgtgcaag aattcgtggc ccagagtatc ttgcacagat gtggcaattc
2281 atatgtgacc ccttaatcaa ggctattggt actgaaccag atacagatgt gctctcagaa
2341 ataatgaatt cttttgcaaa gtccattgaa gttatgggag atggttgcct taatgatgaa
2401 cacttggaag aactgggagg aatactgaaa gcaaaacttg aagggcactt taaaaaccaa
2461 gaattgagac aggtgaaaag acaggaagaa aactatgatc aacaggttga gatgtctctg
2521 caagatgagg atgaatgtga tgtttatatt ctgaccaaag tatcagatat tttgcactca
2581 ttatttagta cttataagga aaagatttta ccatggtttg aacaactact tccattaatt
2641 gtaaatctaa tttgttcaag taggccatgg ccagacagac agtggggatt gtgcatattt
2701 gatgacatca tagagcactg cagtccaact tcatttaaat atgtagaata ttttcggtgg
2761 ccaatgctac taaatatgcg agataacaac cctgaagtca ggcaagctgc tgcttatggc
2821 ctgggtgtca tggcacagtt tggtggagat gattatcgtt ctttatgttc agaagctgtt
2881 ccacttctgg taaaagttat taagtgtgca aattccaaaa ccaaaaaaaa tgtcattgct
2941 acagagaact gtatctcagc aatagggaag attttgaagt ttaagcctaa ctgtgtaaat
3001 gtagatgaag ttcttccaca ctggttatca tggcttccac tgcatgaaga taaagaggaa
3061 gctattcaga ctttgagttt tctctgtgac ctaattgaaa gtaaccaccc agttgtaatt
3121 ggtccaaata attccaatct tcccaaaata atcagtataa ttgcagaagg aaaaattaat
3181 gagactatta actatgagga tccttgtgcc aaacgcctag ctaatgtcgt gcgtcaggta
3241 cagacttctg aagatttatg gttggaatgt gtatcacaac ttgatgatga acagcaggaa
3301 gccttacagg agttgctaaa ttttgcttga agcactttaa tataacttga atattatcta
3361 ttataaaagt aactacaaat aagtgttgtg aatagatttt attataaatc agagaactgt
3421 tttctccctg ctaagcagtt tatagttctt ctccatgttt ctccagaatt aatcagtgtt
3481 agtcctctgt ttatctcgca tgttttatct tccaaacaca gaccttggtg ataacctgtg
3541 cttcaaactg tcttaaacaa tgtttgtcac ctttccccta gttgatgtaa agtatataaa
3601 ttgttgctat ttgtttgaac tattattgat gctagccaag cagtatactt gatgtgaaga
3661 tgtcatgcta tcacaatatg ctaagagctc acaaaaataa gatagaattt ccaggacaaa
3721 catctttgga attgtgagtg aaggatatag tggcaggctt gtccctcttt aattaatact
3781 cttggtattt gtggtgatgg gaggatgctg ttactaggag agttttgaga tactgcagtg
3841 gatgtgggat gtatatgaac ttcttcataa tgtactcctg ggaactgggt aggacatatc
3901 catattgtag ttcccaaggt gtctggttga gagttagaga acttttaaat ttctttagcc
3961 agacaggtct ctattttttt aagttatcca ggactccaag aaccatagtt actgaaaagg
4021 gagtcctgat acatctaata ttggtagcat gtaacagtgt ttgacaaaga gtaagtaagc
4081 agtattcttg ggagtcagtg ttatgtgttt cagcagagta ttattttgta tatgtatgcc
4141 attttctccc tgcaaagcag ctcaacaaga gaaaaagctc tagttatagg gcttaaattg
4201 atttctattt caaataattt cctaagagat tctagagtag aactgaagag tattctattg
4261 gaaaagtgaa aggaaagaaa tgtaattttc tttgaacatg aaaaagaaaa caactttgag
4321 agtagtcatt tagcagtaga tgtgcattat tatgagaaaa cagttctata agtccagggt
4381 taattatatt aattggaatg tcagtcttta atgtcgagct tattgtaggg tagaaaagag
4441 ctttctactc agctaacgat tactcattga tccaaaactt aaatacatct ataatttcct
4501 ggggctattg tgagtactgt gtatgtattt agcaaatatt taagacctag taagtgctca
4561 ataaattgta gctgttattg ctgttgttgt ttgtaaaaaa aaaaaaaaaa aaaaa
//