LOCUS BX537387 3209 bp mRNA linear HUM 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686O2082 (from clone DKFZp686O2082);
complete cds.
ACCESSION BX537387
VERSION BX537387.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3209)
AUTHORS Wambutt R., Heubner D., Mewes H.W., Weil B., Amid C., Osanger A.,
Fobo G., Han M., Wiemann S.
JOURNAL Submitted (16-JUN-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by AGOWA (Berlin/Germany) within the cDNA sequencing
consortium of the German Genome Project.
This clone (DKFZp686O2082) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..3209
/db_xref="H-InvDB:HIT000054202"
/organism="Homo sapiens"
/map="12q23.2"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686O2082"
/tissue_type="human retina"
/db_xref="taxon:9606"
CDS 148..693
/codon_start=1
/gene="DKFZp686O2082"
/product="hypothetical protein"
/note="ADP-ribosylation factor-like protein 1"
/db_xref="GOA:P40616"
/db_xref="H-InvDB:HIT000054202.15"
/db_xref="HGNC:HGNC:692"
/db_xref="InterPro:IPR005225"
/db_xref="InterPro:IPR006689"
/db_xref="InterPro:IPR027417"
/db_xref="PDB:1UPT"
/db_xref="PDB:4DCN"
/db_xref="PDB:5EE5"
/db_xref="PDB:5J5C"
/db_xref="UniProtKB/Swiss-Prot:P40616"
/protein_id="CAD97629.1"
/translation="MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVT
TIPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGI
SKSELVAMLEEEELRKAILVVFANKQDMEQAMTSSEMANSLGLPALKDRKWQIFKTSA
TKGTGLDEAMEWLVETLKSRQ"
regulatory 3172..3177
/regulatory_class="polyA_signal_sequence"
polyA_site 3186
BASE COUNT 990 a 573 c 643 g 1003 t
ORIGIN
1 agtcgcagct gaccctcgct cccgcccccg cctggagtcc gacgtggaag ttgctggctg
61 actgggcttg cgaggaaacc gcctcggagc tgcagccgaa ggccaaggaa tcactgaaga
121 tcggcgaggg aggacagggg gttcatcatg ggtggctttt tctcaagtat attttccagt
181 ctgtttggaa ctcgggaaat gagaatttta attttgggat tagatggagc aggaaaaacc
241 acaattttgt acagattaca agtgggagaa gttgttacta ctatacctac cattggattt
301 aatgtagaga cggtgacgta caaaaacctt aaattccaag tctgggattt aggaggacag
361 acaagtatca ggccatactg gagatgttac tattcaaaca cagatgcagt catttatgta
421 gtagacagtt gtgaccgaga ccgaattggc atttccaaat cagagttagt tgccatgttg
481 gaggaagaag agctgagaaa agccatttta gtggtgtttg caaataaaca ggacatggaa
541 caggccatga cttcctcaga gatggcaaat tcacttgggt tacctgcctt gaaggaccga
601 aaatggcaga tattcaaaac gtcagcaacc aaaggcaccg gccttgatga ggcaatggaa
661 tggttagttg aaacattaaa aagcagacag taattcagtc cattcttctc ccctgaaatg
721 aagactacat cacctctctc cctttggaaa cagtcaagtg tacttcacac tactagatgt
781 taaaactata tgattattgg catatactga ctgactgcaa tatttgtagt aaatagggaa
841 aataagtatt tagttggagg gataatttga tcgaatcacc tgaatgttct atgtaatgta
901 aaatattctt ttcttgcttt cttgtgttaa ggtatatatt ctatttgtat ggaattctta
961 ttcaaataca gttctattaa agagtatact cctattggat gaaaaaaacc tatttttgaa
1021 tagtagttgc agcttgtttg tataaatact aaaaaatatc ttaacagatt tttttcccct
1081 taaaatgaat tatctttcca aagattagac tcagtatgag agtaggtgag gaacatagtt
1141 tgtgtaatat aatctttatt tgcttacctg accacttttt attaagctgt tttgtttaaa
1201 agcttttggt tataggcatg aatattgttt tgatggttaa cttcactgac ttatctgtaa
1261 gtgtcatttt atagtacttt acagttgtca aaaaaaatct tacatatatt gatctagttg
1321 atcggtagag gaagcttgtg aagtaggtag gacaggttat gatgtcttca ctgtatggac
1381 gtgaacccag ggttctaata ggttggcttg cccaaggtca cctgctagct tgtaaggtag
1441 gaatagggct caaagtaaaa cttttggttc agaagcttga ctcataaact atactatata
1501 ttcccaaaaa tgtcagtatt gacaacacag tctaactctt aaataaaatt atgctaatta
1561 gttacattca aaataatgtt tataaattta tttgtctata ctagtagaag tgatcagtga
1621 catactataa ataatcctaa atggttatat ttgatagaat tcataacaca ttaaagagaa
1681 aatttcacat taaaggaagg tttaaaaatc tattttcaga ttataaaagg tgtctttact
1741 ggttttcatt ccttttatct acatgtaatt ggacatgtaa acttgttaaa aatcaaaatc
1801 ttactgattg tacagggaga aattaagcat tctgttttaa aaattaggct tattgctaga
1861 ctgtaagttt aaaaacaatt catgttcaaa ggagcttttc aaattaccca gtccaccaca
1921 gaatcagcta atgtgacaga agtaaatata gtgcgtcata attgctaaaa ccagggtgaa
1981 tttctttcac ttaagttgga aaaccagcct ctaaaaaatt aggtgctggt aatgagagct
2041 taataccatg gttccctgca ggtctcagaa acattagtag ttcctttctt ggccctcact
2101 gtccttccag tgttggcctc tggcctcttc ccctcacatt tatgttcatt ctccgggctt
2161 atattcattc tctgctgctt tctcccttca cccgtgggac tctcaccctt cttgctcatt
2221 ctccagcacc cattcctact ttagtctctt tgaaatcttt tttggagatt ttccttcagc
2281 tacaaatgtt ccagtacaac caatattact cctgaggggc aaagactttt tcatatttat
2341 gtccctagta tctggtatgg cgcctggcat atggcatttc agaatatgtt catagttgaa
2401 acagtaggat agatatttgt catcttgaca agtagccctt tgcaatttat acttgagttc
2461 actcctggtc aatggcacat ggctggaaaa tgcagaaagc aaattcactt acagcctgag
2521 gcttataaag cttgtacagc tgcctcccgg cagtccagga aaactgcaaa aaatgggaag
2581 taaggtcctg gcaggcagac ccggcatgta gccgctggcc atcttgaatc ctagggcatg
2641 aagttgcccc aaagttcagc acttggttaa gcctgatccc tctggtttat cacaaggaat
2701 aggatgggat aaagaaagtg gacacttaaa taagctataa attatatggt ccttgtctag
2761 caggagacaa ctgcacaggt atactaccag cgtttggata ttgatatata catggcaaat
2821 ctgaatattg ttttatgaga ggcctggcaa tgggtaaaac accaaacttg aaatcagaac
2881 ataggtgcaa atggccactc ctgtagtttc ttttctgtaa aatgggatct ggacgaatga
2941 taccaaacgt ttctttctaa cattgtattt tataactctg gcctatgatt gtgttgtgtc
3001 ttgcattaaa aaaaaaaaat ttgagagtgg tagaattact tctgttatct gaaatacctg
3061 agatgcactt taaactgttg aaatgtaagc tctgagggca gggaccgtat cttatttact
3121 gttagtatcc gttgcatcta gtgtggtgca cctggcacac agtaggcact caataaatat
3181 gtattgatta aaaaaaaaaa aaaaaaaaa
//