LOCUS BX537377 6380 bp mRNA linear HUM 17-APR-2005
DEFINITION Homo sapiens mRNA; cDNA DKFZp686H1949 (from clone DKFZp686H1949);
complete cds.
ACCESSION BX537377
VERSION BX537377.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6380)
AUTHORS Wambutt R., Heubner D., Mewes H.W., Weil B., Amid C., Osanger A.,
Fobo G., Han M., Wiemann S.
JOURNAL Submitted (16-JUN-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by AGOWA (Berlin/Germany) within the cDNA sequencing
consortium of the German Genome Project.
This clone (DKFZp686H1949) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..6380
/db_xref="H-InvDB:HIT000054192"
/organism="Homo sapiens"
/map="11q25"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686H1949"
/tissue_type="human amygdala"
/db_xref="taxon:9606"
CDS 137..1153
/codon_start=1
/gene="DKFZp686H1949"
/product="hypothetical protein"
/note="opioid-binding cell adhesion molecule"
/db_xref="GOA:Q14982"
/db_xref="H-InvDB:HIT000054192.16"
/db_xref="HGNC:HGNC:8143"
/db_xref="InterPro:IPR003598"
/db_xref="InterPro:IPR003599"
/db_xref="InterPro:IPR007110"
/db_xref="InterPro:IPR013098"
/db_xref="InterPro:IPR013783"
/db_xref="InterPro:IPR036179"
/db_xref="PDB:5UV6"
/db_xref="UniProtKB/Swiss-Prot:Q14982"
/protein_id="CAD97619.1"
/translation="MYHPAYWVVFSATTALLFIPGVPVRSGDATFPKAMDNVTVRQGE
SATLRCTIDDRVTRVAWLNRSTILYAGNDKWSIDPRVIILVNTPTQYSIMIQNVDVYD
EGPYTCSVQTDNHPKTSRVHLIVQVPPQIMNISSDITVNEGSSVTLLCLAIGRPEPTV
TWRHLSVKEGQGFVSEDEYLEISDIKRDQSGEYECSALNDVAAPDVRKVKITVNYPPY
ISKAKNTGVSVGQKGILSCEASAVPMAEFQWFKEETRLATGLDGMRIENKGRMSTLTF
FNVSEKDYGNYTCVATNKLGNTNASITLYGPGAVIDGVNSASRALACLWLSGTLLAHF
FIKF"
regulatory 6341..6346
/regulatory_class="polyA_signal_sequence"
polyA_site 6361
BASE COUNT 1820 a 1410 c 1358 g 1792 t
ORIGIN
1 ctctcttctg ctctctccct ccctttgcaa acattggatt taaacctgct cagaattcag
61 cacagaggaa ggcagcagcg gtagcagcag cagaagcagt agcaagcccg gcagctgaga
121 gcaccgcagc gtcgagatgt accatcctgc ctactgggtc gtcttctcgg cgacaactgc
181 cctgctcttc atcccaggag tgcccgtgcg cagcggagat gccaccttcc ccaaagctat
241 ggacaacgtg acggtccggc agggggagag cgccaccctc aggtgtacca tagatgaccg
301 ggtaacccgg gtggcctggc taaaccgcag caccatcctc tacgctggga atgacaagtg
361 gtccatagac cctcgtgtga tcatcctggt caatacacca acccagtaca gcatcatgat
421 ccaaaatgtg gatgtgtatg acgaaggtcc gtacacctgc tctgtgcaga cagacaatca
481 tcccaaaacg tcccgggttc acctaatagt gcaagttcct cctcagatca tgaatatctc
541 ctcagacatc actgtgaatg agggaagcag tgtgaccctg ctgtgtcttg ctattggcag
601 accagagcca actgtgacat ggagacacct gtcagtcaag gaaggccagg gctttgtaag
661 tgaggatgag tacctggaga tctctgacat caagcgagac cagtccgggg agtacgaatg
721 cagcgcgttg aacgatgtcg ctgcgcccga tgtgcggaaa gtaaaaatca ctgtaaacta
781 tcctccctat atctcaaaag ccaagaacac tggtgtttca gtcggtcaga agggcatcct
841 gagctgtgaa gcctctgcag tccccatggc tgaattccag tggttcaagg aagaaaccag
901 gttagccact ggtctggatg gaatgaggat tgaaaacaaa ggccgcatgt ccactctgac
961 tttcttcaat gtttcagaaa aggattatgg gaactatact tgtgtggcca cgaacaagct
1021 tgggaacacc aatgccagca tcacattgta tgggcctgga gcagtcattg atggtgtaaa
1081 ctcggcctcc agagcactgg cttgtctctg gctatcaggg accctcttag cccacttctt
1141 catcaagttt tgataagaaa tcctaggtcc tctgagcaac gcctgcttct ccatatcaca
1201 gactttaatc tacactgcgg agagcaaacc agcttgggct tctttttgtt tttttctgtt
1261 attctagatt tgttttcttt ttgtttttgt ttatttgttt gtttgctttt atttccagct
1321 tgaatgagtg gggttggggg cggggtgggc agggttctac cacgtgtagg ataatcattc
1381 attggtgtgt ccaaaaatgg ggtctgctcc tgctaccttg acccttccct ttcccctgct
1441 tctctcctca tcatcattcc caacaacatc ctctgccata cacaacaaaa cgtaagtttc
1501 atttgggcaa aaattgagcc tcacaataaa caccctgaag acacaacttg acttataaca
1561 tagtgcacag caagagctac atccaagtgt cctattatct gtgattattt tcttaatgac
1621 aatgtacata tgcccccatc catgttaatt attatctaat tccattaggg ttcacgtctt
1681 ttctttctgg gacactatcc tactatatcc atatctatag atttcaatat agatgattgt
1741 gccatcttct gtagcccctc cgctctactc attccttcca ccatctgcag agatttgaag
1801 tttggggcta tgcatgaaac ccaacactaa attttgcaag tcaagtgacc aaaaaagggg
1861 gaggcatttt gaagatagaa cctctatttt aaaaagagaa gttcaactca taaacgtgat
1921 tgataggtgg ctgatttatt taggttttgt caagctatct atcaaagtaa tggtacagtt
1981 acccatctac tcaaatatct gatttatctc accatccaat tatctaccca cctgtcttcc
2041 tctctagcaa tctatttact gtttatcaat ctatcaatgt aattgtctaa cactcctttc
2101 tattctctcc ctactactca ctatcaattc atccccatat gaatctctaa ccatattgta
2161 tctctcccac tgtattcatt tatacaccat cagcagacat tggcatcttc aaaattatct
2221 ttcaacttct gtgaaagcca acgatctcac aggttaacaa aatacaaaag caataccctg
2281 tgttgtggac tctttaaaat ctggtatcct atccacccaa gggagacact aacagatagg
2341 ccaaagtagc aagctaatga tcagtcactc actattcccg gaagagcctg tgttttctaa
2401 aacactttct tgggaagcag atcagcctag aaaagttttg attagcactg tggttttcct
2461 tttgcacttg aaggacaaag gtgccagcct ttatgcttct ctcaaccctt caagaaagta
2521 catgtcagga acctatggct ggctttcctt agcagcaaga acttgagaga aaaacacatc
2581 tgtctctgca atgcaaagtg aagagtccac ccgcctgagt gggatgactt cagctagagt
2641 ctcctttctg ctccagttct ggtttaatct gtttgaaaac tatccagtaa aaagctgatg
2701 gaggccaatt acatggcggg tgtattgaca actctggtat ttgtttcagg aagctcttct
2761 aaactgaggg cacttgagca actgacttaa ttttcaagca cttgattaac acaacactgc
2821 aaacagaagg gagaaagtgt cagtgacaca gtttcctctg atgcagctgc ttctccaatg
2881 gctttgggga agaacttcac cagctcttca ggttcaaagc agacccagca tacaaacaag
2941 agctgagcca cctttgctgt cttgtctcct gggacgagaa ggactcatcc agcaaagttg
3001 cctgggattc aaaataaagg cattgcagac cgcacaggtg tgctgcaggg actgatccac
3061 agagaggatg agaatgcagc atcaatcgca gacctgccct gcctcagttg gaaaaccttt
3121 tcaggccctc agtctaaaaa ataaaaaata tgagcaccat tgaattctgt gcccttaatg
3181 cttaactggt cttcttcctc tggtatcagt gtcctctttg tttttgtcca tcaaggcaca
3241 tgagtgtgac ctctgccatg gggaaacaca cacagagata tctatacata tatacataca
3301 tacaaacata ggctatcttg gcacactaaa tgctaagcac tgtcttaaga ggtagagctg
3361 gtgtgagtga aattaatgtt acattttcca gctgtaaaca gacatctgca tttcctagtg
3421 agctgccagg agccagattc gggaaccgta actgatgtgc caggaatggt gcattgattc
3481 ccagttccag ggatgatcat gagcaggcgc aaaatcagaa ttaaaggtcg cacatagacg
3541 tttcagatct gtcaccacct tcagcatctg gagttgagtt ggtgtcagat agtgtatgag
3601 aattaaatgt gtcatctgag catgctactg atgataaatt tgttactttg gagttgaata
3661 aatgtgaagg ctgtgaagag tggacagtct tggagaacac agtgcttgaa atggacaagc
3721 tggacctatt cctcactcca agacttgttc tacaggaaag ggtccatgct cctttggcca
3781 agatcatcag aacctctcaa cccaacaagg ctggcttcag ggccactatg gaaccctgct
3841 gttccccctt ccaaaggata ctaagatgcc cctctggtgg gtacctatcc cagccacgtt
3901 tcagagggag aaaaatgcta cagttgatcc tcatctgtct ggggtaaaga caacaaagta
3961 aatacaaccc aaggcaactg gggtactcac tgggagtgaa aatgacttct tcacaacaga
4021 catatttctg cttctgtgtt tttgtgtttc tttggtgggg atggcttcat gggagagtgg
4081 ctgtcaccca tcattttgaa gcatatagaa caacaaatgc ttacacaaga caatatccac
4141 acttttccaa cttcacacac ggagagtaca tggagaatgc ctacaggcta gatttgttca
4201 gggtgccagt agtgggcatg gggtgggggc aaggcaggac aaaacataca agtctgagca
4261 agtacatctc ttgcaggttt tccacatgaa aaggaagcca aataagtcct gttaggagat
4321 taggtgagag gaattagcaa tgtagggact ctgaaaccct tccccttccc aaaacagagt
4381 tcatatgcac ttccaccaaa gtaatgccaa tgaaagtgct cgtgttaagg ctgcagccaa
4441 gcttgttttt cagtagttta atgtcaagtg cctgatacag tcgactgcaa gtctaaacaa
4501 gcatgtttag tttttctcat tcttgcttta attcagggag ggggagatgt agagaagtgg
4561 ttgtgaaaac atgtacaggc tttatgcaga gcactgcgca tggctgttct gctgcaactg
4621 tgctccacga aacagaagaa aaggtaaggt gttgtgtcac aaagaggccc cagtctcttt
4681 cttcttacat ccatgcctct tactagatga tacatttaca gattgggcag tttgttctca
4741 aaacctgggt gagaagacta ttcctggact ctagcaactt caaaactgag gctgggtttc
4801 agaatctttt tctgcatcaa ttcagtcaat ttgccttcaa caaagagaag tcagcaagtt
4861 ctatttatgc tgaaagaact attccatgag aaaagcagag aaccccaaag tgggcaggca
4921 accccgacga gagcttatcc ctgtggcggc atcaggagtg gctgtacatt gaattttcaa
4981 gtgctggttg gctgtcgcca gcccatggta ggaggggagg aatggcttaa gatgaggtaa
5041 gatctggtgg tggggcatct ttcctcaatt ccatactgac tttgatcttg agaaagaaaa
5101 actggctatg cattacctaa aaccagtcca aaatgaaaca gaccaacaca cacacaaaag
5161 caaattgtca atccctttgg aattaaggga agcagcataa ggtttttctt tttggaaaaa
5221 atgcatttat tttctttttc tccaacagca agaatctttt gttttcattt tgcacgtgac
5281 cttatcttgg aaactcttat acccaattgc ctcccctcct attattcaga gcttccctgt
5341 ctttttactt gaagacaaat aagtttgagc acttgagtaa aacttcacag gtgtgtaagt
5401 aggaaggcaa cattttcaaa aagagaccat atgatgagaa cgcctaatga tcaccacatg
5461 caaacaaaca aaactgccag tctcatttcc cacatttctt acttaagaga agagaagtaa
5521 atgaaaggaa gaagaaatag atttgtaatt aaagatgtgg caaaaagata gggctgagcc
5581 agttcaattt agccttcagg tgcagaatac ttagagtcca aagaaatgtg gagtggactt
5641 aattagatgc agttgtcttt atcctgaaag tagtgagcta agcctaattt ccagcatttt
5701 gaaagagatt cctttttgtt tctttccatg gtgccctctt taaggcacag agttgctcca
5761 caccactggg tggagaaaga aagattgcga acccttgacc atccttttga ggctacattc
5821 tatgttattt ggcagattta taaagctatc agtaataaca atgctatgta ctgcaagctg
5881 cccttgtgtt agttaaaggg agcattttta atcgttcgga aattttcgtg acatgtcaag
5941 tgcagttgtg aggactgtgt gggtgaacga aaatgtgtct gtcaagttca gagtccttta
6001 gatttaaaaa aaaattatga cttatcaatg gtgccgttat agctgtgtca gacaatgggt
6061 gtgcccattc tcacaattat ccttcaaaaa aaatctatgt tcaaatgctt taaaaattta
6121 tcacacgata caagagtatg actttgtcag ccttctagag ttcttttttc ttttattttc
6181 tttcgtattt tttccttcaa aaaatcaatg aagacttgat ttctgtcaat aattgtatca
6241 agggtgaata tactacctga attttgtgca tgttacattg tagttgtaac cttttctaat
6301 tcaggatgaa tacgagatgg ttgtgattgt gcagtgtacc aataaagttc gagaaatttg
6361 caaaaaaaaa aaaaaaaaaa
//