LOCUS BK000280 2590 bp DNA linear HUM 03-FEB-2006
DEFINITION TPA_exp: Homo sapiens class II bHLH protein scleraxis (SCX) gene,
complete cds.
ACCESSION BK000280
VERSION BK000280.1
KEYWORDS Third Party Data; TPA; TPA:experimental.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2590)
AUTHORS McLellan,A.S., Langlands,K. and Kealey,T.
TITLE Exhaustive identification of human class II basic helix-loop-helix
proteins by virtual library screening
JOURNAL Gene Expr. Patterns 2 (3-4), 329-335 (2002)
PUBMED 12617822
REFERENCE 2 (bases 1 to 2590)
AUTHORS McLellan,A.S., Langlands,K. and Kealey,T.
TITLE Direct Submission
JOURNAL Submitted (27-MAR-2002) Department of Clinical Biochemistry,
University of Cambridge, Addenbrooke's Hospital, Hills Road,
Cambridge, Cambs CB2 2QR, UK
COMMENT THIRD PARTY DATABASE: This TPA record uses data from
DDBJ/EMBL/GenBank entry AC110280.7.
FEATURES Location/Qualifiers
source 1..2590
/organism="Homo sapiens"
/mol_type="genomic DNA"
/db_xref="taxon:9606"
/chromosome="8"
/clone="CTD-3232M19"
gene <546..>2074
/gene="SCX"
mRNA join(<546..1112,2036..>2074)
/gene="SCX"
/product="class II bHLH protein scleraxis"
CDS join(546..1112,2036..2074)
/gene="SCX"
/note="similar to murine scleraxis"
/codon_start=1
/product="class II bHLH protein scleraxis"
/protein_id="DAA00239.1"
/translation="MSFATLRPAPPGRYLYPEVSPLSEDEDRGSDSSGSDEKPCRVHA
ARCGLQGARRRAGGRRAGGGGPGGRPGREPRQRHTANARERDRTNSVNTAFTALRTLI
PTEPADRKLSKIETLRLASSYISHLGNVLLAGEACGDGQPCHSGPAFFHAARAGSPPP
PPPPPPARDGENTQPKQICTFCLSNQRKLSKDRDRKTAIRS"
BASE COUNT 477 a 879 c 890 g 344 t
ORIGIN
1 caggcgctgg cgcacatggg aggcaaagac agacagggtg cggtcaggca gcagggccag
61 ggcggctggg ttaactcagt tgtgccacgg gagaaaacgg ggtggtgggt tcctcccctc
121 tcccggggac ggggggcact gcagttttgg ggccctgagt aactacagcc cagaagcgac
181 ctcccagttc ctccgcatcc ccagagacgg aacgatgccc ccaaagacca gccccgcccc
241 ccccaccccc gccaaagcgt ggccacagaa ggccgaggga cgcggcgggc gctgctcgag
301 gagcctccgg gctgagaggg gcggggcgtg cgcgggggag gggccgggac gccgctataa
361 aggcgcagct cggggccccg ctccggcccg ggacgcacat gtgcgcgcga cgcccggcag
421 ctgccaccgc ggggcgcagc cgagaccccg cgcctcgccc cggccggccc gcgaggcccg
481 cggcggccgc aggaggcggc atgagcagcg cgcgacagag ctgacgccgc gcccccgccg
541 gccccatgtc cttcgccacg ctgcgcccgg cgccgccggg ccgctacctg taccccgagg
601 tgagcccgct gtcggaggac gaggaccgcg gcagcgacag ctcgggctcc gacgagaaac
661 cctgtcgcgt gcacgcggcg cgctgcggcc tccagggcgc ccggcggagg gcggggggcc
721 ggcgggccgg gggcgggggg ccagggggcc ggccaggccg tgagccccgg cagcggcaca
781 cggcgaacgc gcgcgagcga gaccgcacca acagcgtgaa cacggccttc acggcgctgc
841 gcacgctgat ccccaccgag cccgccgacc gcaagctctc caagattgag acgctgcgcc
901 tggcctccag ctacatctcg cacctgggca acgtgctgct ggcgggcgag gcctgcggcg
961 acggacagcc ctgccactcc gggcccgcct tcttccacgc ggcgcgcgcc ggcagccccc
1021 cgccgccgcc cccgccgcct cccgcccgcg acggcgagaa cacccagccc aaacagatct
1081 gcaccttctg cctcagcaac cagagaaagt tggtgagcac gggccgtggg gcgccgaggg
1141 gggcctccaa cgcgcccctc agcccacacc tgccaggcag aggaggcgag gccacacggg
1201 cagggctccc caacagggca caggcaggca cacctgtaac acaggcctgc cgggggctgg
1261 ggccttctcc tggggctcct ctcgagggcg tccctaggac actcggctcc cagtggagtg
1321 tggagtcccc tgcagggagc tgcatgaggg gtaagagcta gggatggcca aaggggccca
1381 cccagggcgg ggaggctggg gagctggacc aggccgctgc aagcttccct tttcagtaag
1441 ttgaaaggcg gagtgaaaac agctgagttc agaaagtaag aggctgcaag gcaagagagg
1501 aaggaccccg ggttcttagc ccctgcggcc cagcactggc ttaagccatc ttgggcacct
1561 gctgtccgtc ccccacctag gccgcacacc aagacaccag gtcctgtagg gctgcccgag
1621 acgtgggcca tgggacacga aggcagaggc tggcaggaga tgtgggggct gggggtgagg
1681 gcccctgcag gagacgctgg ccagctgtga tttacagctc ctgctgtgct tggtggcacc
1741 ggaaaagcag ggtgagcagg gagaaaatac ggcacggctt ttcccaatcc ccatttcctc
1801 tccagacagc acgcgcgagc tcctggggcc tgaacatctg ggaaatttaa ttttacaatt
1861 tcggctgtgc agcagtatgc tcccctcccc aaaacgcttg agggaagctg gggagagccg
1921 ggaaggaggt gccttggcgc tggccacctg agatggcacc cagcagggag gccagagagg
1981 cgcagactgg cgctgggctc tgccggggcc tgacactcct ccctcccctc tgcagagcaa
2041 ggaccgcgac agaaagacag cgattcgcag ttaggaggtg gccggcagca gccaggaggc
2101 agacgctgct gggggaggtg gacgcccggg gtgactgcag acagccccca ccttggacct
2161 gagctgggca aggcccaccg caagcatgcc cccaggccag ccctggctgc gagcggggcc
2221 gagggacaga cggacgtaca gacaggcgcc ggcagcggga ctctgcgctg gccccagcac
2281 ctgcccgggc ccactggaac tttctgcgct ggcttttctt ccggccactg tgtgatggca
2341 tcttgtgttt ttgatatgat aatataaagt ctgaaaattt tgtataatta aaaacaaaac
2401 agtatcttcc aaatatggag gccaactgtc ctcatgaaag gttcagaatc cacccccagc
2461 ccccagcctg agcctccatt cccacccttg gtggtcccat cctccttggg ccaagtaccc
2521 cggctccctg ggaagccccc actttccagg ctcagggcca cccctccctg ggctgaggcg
2581 gtgaggatgg
//