LOCUS BG088860 494 bp mRNA linear EST 12-MAY-2010 DEFINITION H3158E08-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3158E08 5', mRNA sequence. ACCESSION BG088860 VERSION BG088860.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 494) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG088860.1. Other_ESTs: H3158E08-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3158 row: E column: 08 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..494 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3158E08-5" /db_xref="taxon:10090" /clone="H3158E08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 174 a 79 c 91 g 150 t ORIGIN 1 aagatttgag tattcagaca gcgctggatt ctatgatttc caaaaggagg tctctcctga 61 gaaccgagag ctgtggaaga aataaaacca atttttttct tttaaaaagc cacataataa 121 aaccactaat gaaatcctaa caatctactt cacattgaag tggaaatatc aagaaggagc 181 ggcatcaact tcaatgaggt gaaagtgcac tatgaagact gtttgccttt gctgcattca 241 gaattcaaat gactgtttga tagcgttgtt taagaactac tgggtcttca ctcggccctg 301 cataagaata tgattgatag tatgcaaaaa taagacagga cttattacca ggaactataa 361 agaccaatca ttaaattttt tattgtgttt tatgaagaaa cacttaagtg tgtgcagcta 421 atttcttctg ttggaaagac ttggaaagtt taaaacatca tagtaagtaa tattaaaaat 481 ttttgtccac actg //