LOCUS BG088694 701 bp mRNA linear EST 12-MAY-2010 DEFINITION H3156D07-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3156D07 5', mRNA sequence. ACCESSION BG088694 VERSION BG088694.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 701) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG088694.1. Other_ESTs: H3156D07-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3156 row: D column: 07 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..701 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3156D07-5" /db_xref="taxon:10090" /clone="H3156D07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 166 a 153 c 134 g 248 t ORIGIN 1 atgctgtcca cttaactctg ctgagctgat tgtgcttcat gcccaagact cacgctactg 61 cactgcaggt ttgtctccac agcaataacc tctgacccct gcgagtcact tcacagagtg 121 ctgtttatct ggagattggg agatcagaca tttaatgggt tttttgaaac ccttgccact 181 ccacttagcc gtgtgcttcc ctgtcggacg cacactcagg ttcctcctca gttgtaatgt 241 tgatttgctg ctttttcaca aaataaaaat ggactgaaag tgtttaattg gcatttttta 301 atgagttagc caaagaagtg caactgtgat tccacatcac agtcctgcgt ttcctcccta 361 aattctattt tgttatttgg ttttctttac tctggttttt agtaacagga tcacgtatta 421 aaatttgctg ttaattaaag tttacctttt gattttacag aaatctcatt gtgacatttt 481 tttccatagc agcccattgg ccaaaatgca taattctgct tcctgtctgt caggtgatac 541 ttgatggtat tcctcttttt ttgattatca aagacttgct tcaggaagtg ctgtttcttg 601 tgcgtaagaa tgttcctgaa gtcacactcg tcagtgacac catctgtcat cattcatcca 661 gtcgtcagca tcgaatatat ggatgcttag ggtaaggctg t //