LOCUS BG088680 691 bp mRNA linear EST 12-MAY-2010 DEFINITION H3156C05-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3156C05 5', mRNA sequence. ACCESSION BG088680 VERSION BG088680.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 691) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG088680.1. Other_ESTs: H3156C05-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3156 row: C column: 05 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..691 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3156C05-5" /db_xref="taxon:10090" /clone="H3156C05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 141 a 173 c 152 g 225 t ORIGIN 1 gcctgctgcc cctctggcct gaagaaccca cagatgtcac ctgtgtccag agaaccaggc 61 tgagcagtgg ctgagctccc atgccatcct gtgcagggtc ctgtggcagc acttgccaga 121 tggcctcagc tctccagaca tgttgctaag cgagcgttgg cctcagcttt cagacttgcg 181 gcttgggggc tggtggggcc ttgcctctgc cccaggacat ccattcggct gatagcccag 241 ccattctggc tatttttaaa gacatatcca cagacctgag gttgctactt ttggcaggta 301 aatccgagct cgctggagca gagttcaagc tcttcttggt ttgttttttt cttttcttgt 361 cttttctttt cttttctttt cttttctttt cttcctttct cttttttttt ttaacaaagt 421 gttatttttc aggctaaatg caacaatgga ttgtataaac caatatttca ccccctttcc 481 taagacagag agagagagag agtgttctca gtttcttgtt tcaaaaagca aaccatcgat 541 gtattttgtt ttcaatggaa aagacaaacc ccatgttctt gaccaaatgc attttgcacg 601 tgtgtgaagt ctgatttccc agcaggccat tctggaaggg tgggttgtca ctctctgggc 661 atcaggaccc tggttctacc atttcctacc t //