LOCUS BG088656 736 bp mRNA linear EST 12-MAY-2010 DEFINITION H3156A03-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3156A03 5', mRNA sequence. ACCESSION BG088656 VERSION BG088656.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 736) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG088656.1. Other_ESTs: H3156A03-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3156 row: A column: 03 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..736 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3156A03-5" /db_xref="taxon:10090" /clone="H3156A03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 249 a 110 c 116 g 261 t ORIGIN 1 aaagctctgc cttagaccag tctttcaaat aatgttagtg ttgctgctgt taggtctgat 61 gttcttgtag ttcctgctct tgtgtgcgaa taaagcagat gaatctcagt ggtcttagaa 121 catgttaata actcagactg tatacacagt tcagacattg ttagtaacta gaatttaaca 181 ggattatcta ttagattaat atttttcaga atttaaaatg ttgcctcatt ctaaaaatta 241 aaaaaaaagc tttatatgta tttctgtaca gacaagtagc attctaatta attaaaaaaa 301 aaaaacaaac tctttcaagt taggataaat agaactaaat ttatgtaaca gaacactaag 361 atttttaatg cctatggaca aaacatgcct tttgagatga taatttaaaa ccaaagccta 421 atagttgttt ttgtgtgttt tgagagagaa gcaagttcaa gtgttaagaa cgtctctgtg 481 agtttttcat cactaagtaa accaactctt aaaaagtgct ttgccttctg agtctgtcta 541 cacttaccac ttcctataat attgcagagc cagttaacca tgaataatct gtcagtctta 601 gagatttata cttgaaaaag taatagtgtg aaggactaat tgttcattcc aagtatttgc 661 ttaaattttt aagtagttgt ctgtaatact ctataagaac ttatttggta ttcctttaaa 721 attttcactt gcagct //