LOCUS BG088307 571 bp mRNA linear EST 12-MAY-2010 DEFINITION H3151D07-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3151D07 5', mRNA sequence. ACCESSION BG088307 VERSION BG088307.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 571) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG088307.1. Other_ESTs: H3151D07-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3151 row: D column: 07 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..571 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3151D07-5" /db_xref="taxon:10090" /clone="H3151D07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 145 a 127 c 156 g 143 t ORIGIN 1 atggcggcct gggccccttg tcggaggtgg ggctgggcgg ctgtgtcctt cggccggcac 61 ccgggcctga gcgcgtcact agctcggaag cccccacggg catggtggct ctcagcttgc 121 agacaaaagg catcactttc tttccttaac cgatcagaac ttccaaacct ggcttataag 181 aggttaaaag gcaaaacccc aggaattatc ttcatccctg gctatctttc taacatgaat 241 ggtataaagg cagtagcagt tgaggagttt tgcaaatctc taggtcacgc ctttataagg 301 tttgactact cagggattgg aagttcagat ggtaacttag cagagtgcac agtggggaaa 361 tggagaaagg atgtcctttc catacttgat gacgtagctg aaggaccgca gatactggtt 421 ggatccagtc ttggtggatg gctcatgctg catgctgcaa ttgcacggcc ggaaaaagtc 481 atagctctta ttggtatagc tactgctgca gatggattgg tgacacaata tcatgcactt 541 cctgttgaga ctcaaaagga aatagaaatg a //