LOCUS BG088267 709 bp mRNA linear EST 12-MAY-2010 DEFINITION H3150H04-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3150H04 5', mRNA sequence. ACCESSION BG088267 VERSION BG088267.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 709) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG088267.1. Other_ESTs: H3150H04-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3150 row: H column: 04 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..709 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3150H04-5" /db_xref="taxon:10090" /clone="H3150H04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 173 a 155 c 127 g 254 t ORIGIN 1 cttgatactt ccagaaaagt ctgtgacctc cacatttcca agtcccaaac cccagttagc 61 acgcaaaagt ggggagatgg gtgaaacagt tcttgactca ttttttttca aggagcagga 121 tccaaaactc cctctcactg tcagaatcaa gtcagaaact ttcttaatgt ttgattggag 181 aaggtcaagg tccattgtgg atgctgtcag cactggcctg gaggttcagg attctgttat 241 atattgaggc gagatctgtc tctcttgtga atctagacct gtcttgttat tgtagtctag 301 ctaggtattt gctacaaaaa tcctatcttc atctcccaaa tgctgatgcc tgcctgacat 361 ttacatgggt attaggtatc caaactctgg tcgttacact ttcatggtaa acactttacc 421 cactaatcca tctccctagc ctggatgtta atacttctaa attactcttt aaatgtatct 481 cttccccccc ctgcccccag ccctctgtgt gtgtgtgtgt gtgtgtgtgt tctgtctaca 541 ctgcttcctg agaaatttca ttttactttt ttttaaactg tagttttgaa ttctccattt 601 atgggagctc cttatcttgt tccatatgta catatctata tgaagtaaaa tgcatatttt 661 ttaactctat ggatcttaat tatagaccat tatagatctt gcttttgtt //