LOCUS BG088262 714 bp mRNA linear EST 12-MAY-2010 DEFINITION H3150G09-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3150G09 5', mRNA sequence. ACCESSION BG088262 VERSION BG088262.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 714) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG088262.1. Other_ESTs: H3150G09-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3150 row: G column: 09 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..714 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3150G09-5" /db_xref="taxon:10090" /clone="H3150G09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 174 a 176 c 158 g 206 t ORIGIN 1 ggaaaaggct tattttggct cccagtttga aggcatagtg aggaatatag ctgctttcat 61 tgtgtccagg gataacactc agcttgcctt ttccgttttc ctctgtcagc cacgttcaca 121 gtggttcttt ccaacctcag ttaagcctgt ctggaagcat cttcacagat gcgccctgag 181 acctgttgtc taggtgatgg taaacccagt caagctggca atggggatga accatcatac 241 tgtctgtcca aagtatttgt gacataccta ccaaagatcc ttgccttcaa aggtgaaagg 301 gcatagtgtt atatcagtaa agccccagcg gagggttcag ggtgactgag cctgtgaatt 361 gtagtttgtt cttcacagct ctctgatagc ctagtggagt cccaatcacc tgatgtgggc 421 cccaagttac tacagccagc ctctgtggtg ctgagtccta tccctaagct ccatccttct 481 aaatacatgg tgactaagta tactgacaac aagcatgggt agtaggggcc agtagctatt 541 tgagcaaagt accaaattca cccttggctt tacatctcac ctctcacctc cgtgtaaaag 601 aatcaaatcg agtatctgta cctctcatct gtcagtgttg gagtttaggt tagcttcagt 661 ttatctcccc ctcagtagca cactcctgca ctgcgtttca catgatcttg agaa //