LOCUS BG088203 692 bp mRNA linear EST 12-MAY-2010 DEFINITION H3149H08-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3149H08 5', mRNA sequence. ACCESSION BG088203 VERSION BG088203.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 692) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG088203.1. Other_ESTs: H3149H08-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3149 row: H column: 08 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..692 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3149H08-5" /db_xref="taxon:10090" /clone="H3149H08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 179 a 172 c 183 g 158 t ORIGIN 1 cgctttgttt tgatttattt atctttttcc ctaacgactg acaacaggcg gcttgttgca 61 cttagggatc cttgaagtgg ctgggcctga gagtgagacc ccagtcctcg gctggggttc 121 tttccaaata gaagaaacgg atccagaggg gctacagacc aaaattgttg agaaccagac 181 atacgatgag cgtctagaga ttaacgactc ggaagaggtt gccggtatta gcactccaac 241 cccaggacag caaggccctc ctttttctgc cgctcttccc aacaagacga tggctgataa 301 cagcagtgac gagtacgagg aggacaataa ggagaagaag aagccctccc agctggcacc 361 gcagcagggc ttcagtgaga acgatgatga tgacgacgat gactcctctg agacggattc 421 cgatgacgac gatgacgatg aggagcatgg agcacctctg gaaggggcgt atgatcctgc 481 cgactacgag catctgccag tctcggccga gatcaaggag ctctttgagt acatcagccg 541 gtacacacct cagttgatcg atctggacca caaactgaaa cctttcattc ctgattttat 601 cccagctgtt ggggatatcg atgcattttt aaaggtgcca cgtcccgatg gaaagcctga 661 ccaccttggc ctcttggtgt tagatgaacc at //