LOCUS BG088202 666 bp mRNA linear EST 12-MAY-2010 DEFINITION H3149H07-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3149H07 5', mRNA sequence. ACCESSION BG088202 VERSION BG088202.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 666) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG088202.1. Other_ESTs: H3149H07-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3149 row: H column: 07 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..666 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3149H07-5" /db_xref="taxon:10090" /clone="H3149H07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 188 a 166 c 192 g 120 t ORIGIN 1 caggatggcc tcaggcaaag tacgctgcac ccgaaagctg cggagctgga tcgtggagca 61 ggtggagagt ggccatttcc caggggtgtg ctgggacgat gcagccaaga ccatgttccg 121 gattccctgg aagcatgcag gcaagcaaga cttccgagag gaccaggatg ctgccatatt 181 caaggcttgg gcactgttta aggaaaagca caaagatggg gacataggac accccgctgt 241 ctggaagact cgcctacgct gtgccctcaa caagagttcc gaatttgagg aggttcccga 301 gagaggtcgt atggatgttg ctgaacccta caaagtatat cgaatactgc cagcaggaac 361 cctccctaac caaccacgga accagaaatc accatgcaag cgaagtatca gttgtgtgtc 421 acctgagagg gaagaaaata tggaaaatgg gaggaccaat ggcgttgtaa accactcaga 481 cagtggcagc aacataggcg gtggtggcaa tggcagcaac aggagcgaca gcaacagcaa 541 ctgcaactct gagctagagg agggagctgg cacaactgag gccaccatta gagaggaccc 601 agtgttcctg gagcatcaac ttcctctgaa ctcagactac tcgctgctgc tcaccttcat 661 ctatgg //