LOCUS BG088189 724 bp mRNA linear EST 12-MAY-2010 DEFINITION H3149G04-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3149G04 5', mRNA sequence. ACCESSION BG088189 VERSION BG088189.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 724) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG088189.1. Other_ESTs: H3149G04-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3149 row: G column: 04 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..724 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3149G04-5" /db_xref="taxon:10090" /clone="H3149G04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 224 a 141 c 173 g 186 t ORIGIN 1 ggcagagatc tacgctgacc tgtcaccatc agtcccctct ctcaacggtg aaataagtga 61 ggcgtttgaa gagctagatt cagcaccttt agagaaaagt tctactgccg atgctgagct 121 tgtccatcag aatgggcagg aatttcagag gtcttctgaa gatggcgttg ttagaaagag 181 gcgacaagac gatactgatc agggaagaca gacagaaaat tcaactgaag atgcagactg 241 tgctccaggc catgttgagc aaaatactag tgatagagcc aaccaccaaa aaataaaaaa 301 ataataataa aaatacatct tggatgtaaa cctcctgaaa tggtcacgta ataaactctt 361 cagtgagcac tggatgtgtt taacggcgag taaaacatgt gaataatcgg atgtgctcca 421 tgcatggcac agttcatggt ttggccttat gaagcactgt ctaagccccg atccagtctg 481 cttctacttg ttaaatactt gaaggtccag gacactcttg acatgtttgt ttaagaagtt 541 ggatatagtt agcttaaagt agtttgggtt ctactttaga aggtctgaag gtttgcacat 601 ggtcatgttc ataactatat cacccccata agaggtgcac agcttttagg tgatcacagg 661 agtgggcaag tgtgtataga catcggtgta acgggtcgct cacgagtgaa accagacatc 721 agca //