LOCUS BG087967 662 bp mRNA linear EST 12-MAY-2010 DEFINITION H3147A08-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3147A08 5', mRNA sequence. ACCESSION BG087967 VERSION BG087967.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 662) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG087967.1. Other_ESTs: H3147A08-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3147 row: A column: 08 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..662 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3147A08-5" /db_xref="taxon:10090" /clone="H3147A08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 147 a 155 c 167 g 193 t ORIGIN 1 ctggaagatt ttataagagt tttggggggg ggggggacag taaacgtcct gagccacttg 61 ggttcttcag gagtttctct tagggaaagt ttttttttcc tctttttaat atataactat 121 aatatatatg aatatttttt tagctaatgt ttgtgagagt ggggcctgca cacgtgttcc 181 tgtcagaggc aaggctcaca ttccttgcca gcacctcttt ctctgcccaa ttgaggggaa 241 caaaagggtg ttcacagatg gagcgagctt gcagccgcgt ggctgtgctg ctctgtgaga 301 aggcgtgcca gccattagga agccccaccg ccaaaggagg tgcacccagg agggtcctca 361 gaatcatgga cttctacccc attgctggta gacaattttc atctctgctg gtggtggcct 421 cttgttgact ctgaaacttg tcaccttgtc accagctaga tgtcaagact tggctgccct 481 ctgatgtggg tgcttctgcc ccttccctgt tctaactgtc cgacgggctc ccagtctctg 541 tgtgtccagg ccagaggacc agcactcagg agagtctgcc tttggattga gttcccaaat 601 tagagtcatc gcaccagggt gcaattttaa tttaaaaact taaaagactt ttccaacttc 661 aa //