LOCUS BG087836 637 bp mRNA linear EST 12-MAY-2010 DEFINITION H3145E04-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3145E04 5', mRNA sequence. ACCESSION BG087836 VERSION BG087836.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 637) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG087836.1. Other_ESTs: H3145E04-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3145 row: E column: 04 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..637 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3145E04-5" /db_xref="taxon:10090" /clone="H3145E04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 194 a 157 c 174 g 112 t ORIGIN 1 tactgaggca gctggagaca aaccaactag acatcgatgc cacactagag gagctataag 61 tgcagcagga aaccgaggac cagaactaca gcatcttcct tgaaatgatg gaggctcgaa 121 gtcgaggcca cgcatcccct ttggcagcca atgggcagag cccatcctca ggctcccagt 181 cgccagttgt gcctccaagt gctgtatcca cgagaggcac gccaccgtgg tcagatggtc 241 tcaccactga tgactctgaa agaccccagg aagggaagga caaacaggtg tcatcagaga 301 gtgatcctga ggggcccatt gctgcccaga tgctgtcctt cgtcatggat gacccagact 361 ttgaaagtga tgaatcagat acacagagga gaatgggcag gtttccagta agagaagacc 421 tctctgatgt aactgatgag gacactggcc ctgctcagcc acctccacct tccaagctcc 481 caggtgcttt cagactgaag aatgacttcg atctctttgg gctgggccta gaggagatgg 541 gacctaagga aagcagtgac gaagatagag acagcaaact tccctctaag gagaagaaga 601 aaaagaagaa gaaaagcaaa gaggaggaag aaaagac //