LOCUS BG087549 607 bp mRNA linear EST 12-MAY-2010
DEFINITION H3141B01-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3141B01 5', mRNA sequence.
ACCESSION BG087549
VERSION BG087549.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 607)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG087549.1.
Other_ESTs: H3141B01-3
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3141 row: B column: 01
Seq primer: -21M13 Reverse
POLYA=No.
FEATURES Location/Qualifiers
source 1..607
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3141B01-5"
/db_xref="taxon:10090"
/clone="H3141B01"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 201 a 98 c 126 g 182 t
ORIGIN
1 gttcctgact cattggtggc atctaaggaa atgcttttac tatggatagt ataatactta
61 gtgatgaaag actcagtgct gtgtctgtga ttggtgacaa gacaggaaac cctagatgct
121 gatcagaaaa acttaagatt ggattgcaaa ccagcctttt ttcagacagg tgttttaatt
181 gcatatgtag aaaatctata ttgatcttga aaaattacta aaattattaa gtgactttag
241 caaaggatat gggtaacaaa atcagttctt tctgtaaaca cctgttagca aaaataaact
301 cttggaaaat gaagttccag aatcattaga gtagcttaaa aagtacaaaa tagttattgc
361 tacagtaaag gaaatatgat gaggccaaca tattaattac tggggggaca tgaaagactt
421 gaatacatga gtgagatgtc ctcttctggg taagctgtgt ggctcagtga cagagtaatt
481 cccttgtgtg tcccaagccc ctcaagccca tgggcgggca cacatgacaa aaacagtggc
541 ttattcctgt attagaaagt acagtgtgat taaggtacct gttcttatct cactcattta
601 ttaattc
//