LOCUS BG087511 608 bp mRNA linear EST 12-MAY-2010 DEFINITION H3140F01-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3140F01 5', mRNA sequence. ACCESSION BG087511 VERSION BG087511.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 608) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG087511.1. Other_ESTs: H3140F01-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3140 row: F column: 01 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..608 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3140F01-5" /db_xref="taxon:10090" /clone="H3140F01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 169 a 153 c 131 g 155 t ORIGIN 1 atcgttcagg aaactatgca tttccaagcc attatatagt ctgggcaaga taagttctta 61 tttcatttgt ctaatactca tgttcaaggg aggccctggt tcagtctggg cgcagggctc 121 gcagattaca ccttacagcc tctcatgttc agataactgg caacaaagca ataaaaagcc 181 gtccaacttg tcagtgcgta gcagcaaagc cctgaaaatt cggaagaaca ttttcagcag 241 gggaacagca aacacaaagc tgatttatgt gtttctaaaa ccaggatatt ccaacaaggt 301 cagctttaca atctgcacag cgggttcatt gtgctaactt tacaggccct agtgacatca 361 tacaaagcct tcaacaaccc ctccaccccg cctttactgc tttattaccc tgaaaagtga 421 gctaaccacc caccttcatg tgggcaggac aaagggctgg ctctcattag atgattagct 481 cattcaggtc acatctaggt cacttccacc tttgtctgga ttccaaggtt agccctcatc 541 taggtgaggg gatggggccc ctgtgaagtc ctcagagctc accctggaga gttaagatgg 601 gcacaatg //