LOCUS BG087324 608 bp mRNA linear EST 12-MAY-2010 DEFINITION H3138C03-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3138C03 5', mRNA sequence. ACCESSION BG087324 VERSION BG087324.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 608) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG087324.1. Other_ESTs: H3138C03-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3138 row: C column: 03 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..608 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3138C03-5" /db_xref="taxon:10090" /clone="H3138C03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 158 a 157 c 184 g 109 t ORIGIN 1 cgccggtcga ggagccaccg gcggagtcgc aaggtctgac cacacagcaa attccagtcg 61 ctacagccgc cgccatgaag gccgtggtgc agcgcgtcac tcgggctagc gtcacagttg 121 gaggagagca gataagcgcc atcggacggg gcatctgtgt cttgctgggt atttccatgg 181 aagactcgca gaaggaactg gaacacatgg ttcgaaagat tttaaatctg cgtgtgtttg 241 aggacgagag tgggaagcac tggtccaaga gcgtgatgga taaggagtac gaggtgctgt 301 gtgtcagcca gttcaccctc cagtgcgtcc tcaaggggaa caagcccgac ttccacctgg 361 ccatgcccac agagcaggca gagagcttct acaacagctt cctggagcag cttcgcaaga 421 gctacagacc agagcttatc agagatggca agtttggtgc ctacatgcag gtgcacattc 481 agaacgatgg gcctgtgact atagagctgg agtcccctgc tcctggagct gctagctctg 541 acccaaagca gctgtcaaag ctggagaaac agcagcagag aaaagaaaag accagagcca 601 aaggccct //