LOCUS BG087278 713 bp mRNA linear EST 12-MAY-2010 DEFINITION H3137F11-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3137F11 5', mRNA sequence. ACCESSION BG087278 VERSION BG087278.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 713) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG087278.1. Other_ESTs: H3137F11-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3137 row: F column: 11 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..713 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3137F11-5" /db_xref="taxon:10090" /clone="H3137F11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 193 a 166 c 180 g 174 t ORIGIN 1 ctgagatcta agtaagatcc atttcctcgc tctgccgcag cagcgtcttt tagaaggact 61 gccaggcaca atgaaggttc tcttactaaa agacgccaag gaggatgaca gcggcctgga 121 tccatatatc caggagctgc gattgtgtgg cctagaagcc acactgattc ctgtgctgtc 181 atttgagttt atgtctctcc ccagtttgtc agaaaagctg tctcatcctg aaggctttgg 241 aggactcatt ttcaccagcc ccagggcagt ggaagcagtg aagctgtgtt tggagaagga 301 caataaaact gaagcctggg agaagtctct gaaagacaga tggaatgcca agtctgtgta 361 cgtggttgga agtgccaccg cttctctagt gaataaaatt ggtctggatg cagaaggagc 421 gggcagtgga aatgcagaaa agcttgctga atatatttgc tcaaagccat cttcagagct 481 gcctcttctc tttccgtgtg gaactatcaa aggagatact cttccaaaaa tgctcaagga 541 caaagggatc cccatggaaa gcatgcatgt ctatcagaca gttccacacc ctgggatcca 601 agggagcctg aagagctact atgaagatca gggtatccca gccagcatca cgtttttcag 661 tccctccggc cttaaataca gcctcgagta tattcaggcg ttatctggca gca //