LOCUS BG087269 713 bp mRNA linear EST 12-MAY-2010 DEFINITION H3137E12-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3137E12 5', mRNA sequence. ACCESSION BG087269 VERSION BG087269.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 713) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG087269.1. Other_ESTs: H3137E12-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3137 row: E column: 12 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..713 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3137E12-5" /db_xref="taxon:10090" /clone="H3137E12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 219 a 168 c 218 g 108 t ORIGIN 1 ggccaagact ggtgagaagg tgacccacac acaaaaggtg gtgctgcagc aggacccaca 61 gcagaccagg gagcatgccc tgctccgagc ccagctggag gaagagcggc accggaggca 121 gctactggag ggtgagcttg agccgctgcg tagaaagttg gctgccctgg agaaggcaga 181 gatcaaagaa aaggtggtct tctctgagag tgtccaggta gaaaaaggtg acactgagca 241 agagatccag cgcctcaaga agagcctgga agaggagagc cagagcaaga gggagctgga 301 ttcagaggtg acccggctag aagccaagtt atctgagcta gaattctata attccaagtc 361 atccaaggaa ctggacttcc tgagagaaga aaaccacaag ctacagctag agcggcaaaa 421 cctgcagcta gagacccgga gactccaatc agagattgag atggcagcaa cagaaactcg 481 agatctgaag aacataacca cgatagactc tgggacccac ctaaactcta ggctgtggtc 541 cctagagaag gaactggatg acctcaagaa gatgtccaag gacaaggatc tggagatcga 601 tgaactacag aggcgcctgg gctctgtggc tgtcaagaga gagcagaggg agaaccacct 661 gaggcgctcc atagtggtca tagaccctga cacaggtcgt gagctgtccc cag //