LOCUS BG087190 633 bp mRNA linear EST 12-MAY-2010 DEFINITION H3136F03-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3136F03 5', mRNA sequence. ACCESSION BG087190 VERSION BG087190.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 633) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG087190.1. Other_ESTs: H3136F03-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3136 row: F column: 03 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..633 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3136F03-5" /db_xref="taxon:10090" /clone="H3136F03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 206 a 101 c 130 g 196 t ORIGIN 1 gtggcattaa aatgatctgt attaataaca tatttcatgt tttcaaggaa atgtaatgct 61 tcataatagt aatctcagaa gccgttgcag tggagaaagt taatcacctg gagaaaggtt 121 tacgttcata gaattgcaag tcattttaga tcattaggag acagacaagt ataccttcaa 181 cagctaatgg cttatctttt agaacaactc agagttggcc taaggaaaag tgcattccta 241 atacagattg aaagagctga tgcacattca atcggccttg ggcttgtttc acactttaaa 301 actgtctttg cctacagtat aaacaactcg aatgttctat ttatttttaa cattgccatc 361 tgtcactgta ggatgccaaa tcggaaagat gcatctatag tttgagtctg aaaacttaaa 421 gctccctata ttattattca acaagggcaa tgggaatttt ttccccttta aagctgtttt 481 ttttttaatg ttcttattgt gttcaataac tcatgtagat gaaaatgaaa ctgaggtagt 541 gtgtcctgac caagacagca aatagcctta gtgcttaagg ggggaaggta caattttgag 601 agaacagaaa gggaggagaa gcaggggata gca //