LOCUS BG087088 611 bp mRNA linear EST 12-MAY-2010
DEFINITION H3135D06-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3135D06 5', mRNA sequence.
ACCESSION BG087088
VERSION BG087088.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 611)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG087088.1.
Other_ESTs: H3135D06-3
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3135 row: D column: 06
Seq primer: -21M13 Reverse
POLYA=No.
FEATURES Location/Qualifiers
source 1..611
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3135D06-5"
/db_xref="taxon:10090"
/clone="H3135D06"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 133 a 188 c 182 g 108 t
ORIGIN
1 aacccgaatc cgtggcggga cgaatggaca cagcaaccag ttttcacaga tgctctccag
61 agaagtagct acaatccggt gtgcaggaga atcatcaaaa caacctgggg aagtgagcgt
121 ggcggtcccg agccccgccc tcaagtggca ggctgtgccc ccaccgtcac gtgttggcga
181 ctagccaatc atccagggtg ggcgggggga ggcatggaat ggggcgctca ccttgtgtac
241 cttaggtcaa ttcgtgtggc ctcacgtcgc atagcggagc cgatcctgag cagcgccagc
301 aggcttcaga ggcggacgcc atggcagcga ccttccgggc gagcgaacac cagcatattc
361 gctacaaccc gctccaggac gagtgggtgt tagtgtcggc tcatcgcatg aagcggccct
421 ggcaaggaca agtggagccc cagcttctga agacagtgcc ccgccacgac ccactcaacc
481 ctctgtgtcc cggggccaca cgagctaatg gggagtaggt gaatccccac tatgatggta
541 cctttctgtt tgacaatgac ttcccggctc tgcagcccga tgctccggat ccaggaccca
601 gtgaccaccc t
//