LOCUS BG086984 546 bp mRNA linear EST 26-JAN-2001 DEFINITION H3133B10-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3133B10 5', mRNA sequence. ACCESSION BG086984 VERSION BG086984.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 546) AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A., Tanaka,T.S., Carter,M.G. and Ko,M.S.H. TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set JOURNAL Unpublished COMMENT Other_ESTs: H3133B10-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3133 row: B column: 10 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..546 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3133B10-5" /db_xref="taxon:10090" /clone="H3133B10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 198 a 101 c 111 g 136 t ORIGIN 1 gcagatgctg gcaaggacat ggagaaagag aaacactcct acattgctgg agggattgca 61 agctggtata accactctag aaatcagttt ggaggttcct cagaaaattg gacttagtac 121 taccagaaga tccagcaata cctctcctgg gtagatgttt caatttgtaa taaggacaca 181 tgttccgcta tgtttatagc agccttattt ataatagaca gaagctggaa agaacccaga 241 tgtccctcaa cagtagaatg gatacagaaa ttgtggtaca tttacacatt tacactcagc 301 tactaaaaca atgaatttat gaaattctta ggcaaatgga tggatttgga ggatatcatc 361 ctgagtgagg taacccaatc acaaaagagc acacatgata tgcactcact gataagtgga 421 tattagccca gaaatttaga ctacccaaga tacaatttgc aaaacacatg aaacttaaga 481 agaagaaata ccaaagtgtg gatacttcgt tccttcttag aatggggaac aaaataccca 541 tgaaag //