LOCUS BG086741 679 bp mRNA linear EST 12-MAY-2010 DEFINITION H3130A06-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3130A06 5', mRNA sequence. ACCESSION BG086741 VERSION BG086741.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 679) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG086741.1. Other_ESTs: H3130A06-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3130 row: A column: 06 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..679 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3130A06-5" /db_xref="taxon:10090" /clone="H3130A06" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 235 a 142 c 131 g 171 t ORIGIN 1 ggctttggga gttgaaggca ggaattaaag gccagccctt ggtacatgag actgtcccct 61 accaaaaaga aagaaaagga ttaacaaaac aagtacttta ccatttacaa atctttcata 121 tacattctct catttgacct cacaacaacc ctgtgaggta ggcagcaaat gttttcatgg 181 tacagatgag gatagtgaat ctccaaacca ttaactgacc tgcccaggtt tctacagtta 241 gcaacaaatc tgtatgtcag tctttggcct aaaaactcaa cacccaacct tcccttcact 301 accctaccta cttcacaggg ataataaaga taaaatgaat tcaaggctca aaaaaatatg 361 tttgagggga aagaaatcac tgtataatta catactataa tgatctgtga cataatggtt 421 catctccttt cccatcccag tttgtgtatg aactcagaat tttatctctc ttctgtgctc 481 aactaaagaa ggaaggaagg caggcagggt aagagtgtag ttcttttgga ggctatgtaa 541 attacaatca aggtagctgc agcattacac aaactgaaaa cgacacagac taatgtgcaa 601 ccagaacgca ctaaagcaca cacagcaagg cagcattatc agatgggcag gattgcatag 661 aaagaaaacg tggtgtcag //