LOCUS BG086571 618 bp mRNA linear EST 12-MAY-2010 DEFINITION H3127H06-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3127H06 5', mRNA sequence. ACCESSION BG086571 VERSION BG086571.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 618) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG086571.1. Other_ESTs: H3127H06-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3127 row: H column: 06 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..618 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3127H06-5" /db_xref="taxon:10090" /clone="H3127H06" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 192 a 124 c 150 g 152 t ORIGIN 1 cattattcac attgcaattc agaagatcca agagtgaagc tagagttgag actactggaa 61 actgaagccc tcgcccagga catctagtgt tcaatacagg agcagcagaa cttgcttagt 121 cagaagagtg ataagcaatg agttccaaac agcaatgtgt gaaactgaat gatggcaact 181 tcatccctgc gctgggcttt ggcacctaca aaccagaaga ggttaatgaa aataagccac 241 tggaggctat ccatttagct ctagaggctg ggttccgcca tattgatact gcttatgtgt 301 accaaactga aaatcatgta gggcaggcta ttcgaagcaa gattgcagct ggccttgtga 361 aaagagaaga catattcctc actacaaagc tttggtgcac tttccatagg ccagagctgg 421 ttcgctctaa cttggagaaa tctttgaaaa acctgcagct ggattatgct gacctctatc 481 ttatacatta tcccgtgcaa atgaagccag gggaagatct gtttccagaa gatgagcatg 541 gaaaaacatt atttgacaca gtggatatat gtgccacatg ggaggccatg gagaagtgta 601 aggatgcagg attggtca //