LOCUS BG086210 694 bp mRNA linear EST 12-MAY-2010 DEFINITION H3123A10-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3123A10 5', mRNA sequence. ACCESSION BG086210 VERSION BG086210.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 694) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG086210.1. Other_ESTs: H3123A10-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3123 row: A column: 10 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..694 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3123A10-5" /db_xref="taxon:10090" /clone="H3123A10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 195 a 131 c 146 g 222 t ORIGIN 1 gcctgttccc cacttcccac agtagttgtc tcatacattc tctaacttac agctggtttt 61 ggaagaatag cgaattaatg ccagatactt ccatcctgca tggaagccaa ggtcacaagt 121 tcttctttgc aaacaggagg aagagcttta atgatttctt ggcgaagctc tggttttatg 181 cagtcggagt tctatcactg atacagcctg ttgtattatg ggtagacttg gatgcttttc 241 aaagccgttc tgtgaacaca gtggaccatg tagagaagac cttttgttcc ttgtaggtac 301 tgaaggagtg agtctaagga aattgttaga gactttctaa actgtttcat ggtgtatttg 361 aggttctcta catacagaat caaagcctgg tgatgaagtg ttacgactta cacccaccaa 421 actctggaag ttttgcagtt aggccccagg agggctttga gctctttctc ctctgtacat 481 ttgacactgg gtaactgaga tgcagttcca gtactgggca gagtgacatg caggaaaaga 541 aagggtctta attacaatat ttaaactttt ccaggaattt aaaatattcc taagtacata 601 attgaactgt tacttagttc acttgaaaaa tgaagtccat tttgtcaggc cattataaag 661 tcttcacatt tcatactttt ttaagagaat aatt //