LOCUS BG086086 699 bp mRNA linear EST 12-MAY-2010 DEFINITION H3121F03-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3121F03 5', mRNA sequence. ACCESSION BG086086 VERSION BG086086.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 699) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG086086.1. Other_ESTs: H3121F03-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3121 row: F column: 03 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..699 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3121F03-5" /db_xref="taxon:10090" /clone="H3121F03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 167 a 140 c 150 g 242 t ORIGIN 1 atttggagtt gcttgtttgt gcaccctagt ggataaaagg ctcataaatc actgggaatc 61 cgtgggtggc acgctcaggt gcactggctt gcttctgtct ttatccaaga taaaagtcga 121 attcacttac ttttatattc aattatgaag ggcaaagtgt ttggggaggc tcgactgtct 181 cctccctgtg ttgtttctcc tcttggtttt ttggtttttt ggtttttttt tttttttgtt 241 tgtttgtttt tttgtttgtt tgttttttgg tttttcaaga cagggtttct ctgtatagcc 301 ctggctgtcc tggaactcac tctgtagacc aggctggcct caaactcaga aatctgcctg 361 tctctgcctc ccaagtgctg ggattaaagg cgtgcgccac caccgcccgg caagaatttg 421 tatctttaac tagatcttag aaatatcagc atgacaaata tcccatatgg acatgagaag 481 aaagactgcc tccctcgctt ctacctcttt aaccacaggt tcagaaagaa aaaggtattt 541 tgttagagac acattaattt ttttaaattg atgtcgtttg aggctgaata gtcctagcag 601 aactaggaga aaaagaagtt gaaacaaact gggcagtttc tattgacttg tccgattctc 661 attttgaaca gtcacacctt ggaacattgc actggacac //