LOCUS BG086052 705 bp mRNA linear EST 12-MAY-2010 DEFINITION H3121B12-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3121B12 5', mRNA sequence. ACCESSION BG086052 VERSION BG086052.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 705) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG086052.1. Other_ESTs: H3121B12-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3121 row: B column: 12 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..705 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3121B12-5" /db_xref="taxon:10090" /clone="H3121B12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 124 a 214 c 186 g 181 t ORIGIN 1 cttcaaggac ctatggtgga acttttcctt cctgaggccc aagccgtgga gtcttcctgt 61 cgtgccccgt cagggagacc tgagataggc tggctcccag gcaccttgct tcagattcca 121 tgctaatttc taatctagga gattccccta ggacccgctg cagaggcatg ggctcctctg 181 tggtcctggc cagacctctg cccccaaatc tcactgactg ttctagcctt ggccttgggg 241 cctaagggtg cattcagcct gggtgtgctt acctgccact cacctctcta tctagttgtc 301 gagtctaggg aagggcagag ggtgggtcct ggccactggg tgccactgtg ggagccgggg 361 cacctgtcat tctttctgag taggtgggcc tgtatccaga gcagggtcta ggggctcctg 421 ctcccggctc atctcagtgg cctgaagcat tcaaaactct agccagcccc atcctcctcc 481 ctgccagaat ggtccagtcc ctgggccctg ctggagagca gctcaaactg cctttcatct 541 ctgccaaagg caggcagatg ctgtattttc aaattctcct gccctctttt cccctttttc 601 cctgtattta tttattgctt gtgctaaaga ccaaactagc cgcccccttt agtgcaccca 661 atggaggaag ccactgaggg gggagccgtg tgcctgtgcc aggca //