LOCUS BG085920 757 bp mRNA linear EST 26-JAN-2001 DEFINITION H3119F07-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3119F07 5', mRNA sequence. ACCESSION BG085920 VERSION BG085920.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 757) AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A., Tanaka,T.S., Carter,M.G. and Ko,M.S.H. TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set JOURNAL Unpublished COMMENT Other_ESTs: H3119F07-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3119 row: F column: 07 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..757 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3119F07-5" /db_xref="taxon:10090" /clone="H3119F07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 340 a 151 c 117 g 149 t ORIGIN 1 agacttcaac tccctacttt ggccaatgga caggtcatta aaacagaaat tgaacaaaag 61 aacaatgaaa ataacatgtt gtaaaccaaa tgaatttaat agatatctac agaacctttc 121 acacaataaa caaaatttta taccttcttc tcaacacctc acagaacctt ctccaaaatg 181 gaccacataa tcagacacaa agcaaacctc aaaaggtaca agaagattgg aataacccac 241 tgtattctat cagataatca cagattagtg atggacttaa acaacaaaaa ccacagaaag 301 cacacatact catagaaact gaaaaattct ttactcaatg atcacttgga aagggaagaa 361 ataaagaagg aaattaaagt ctttctataa ttcaatgaaa ttgaaggcac aacgtaccca 421 gacttccagg aaacaatgaa agtagtgcta agaggaaaat ccataccact aagtgacttc 481 attaagaagt tggaaagagc ccatacaagc aacttaacag cacaccagaa agctctagga 541 caaaaaagaa gcaaatccac tcaagagtag agggcaggaa atagccaaac tcagggctga 601 aatcaatcca attagaaata aagagaacaa tacaaagaat caacaaaact aagatctggt 661 ttttgagaaa atcaacagga tagacaaacc cttagctaaa ctcactaaaa ggcacagaga 721 cagtatccaa attaacaaaa aaaaaaaggg cggccgc //