LOCUS BG085904 706 bp mRNA linear EST 12-MAY-2010 DEFINITION H3119E02-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3119E02 5', mRNA sequence. ACCESSION BG085904 VERSION BG085904.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 706) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG085904.1. Other_ESTs: H3119E02-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3119 row: E column: 02 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..706 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3119E02-5" /db_xref="taxon:10090" /clone="H3119E02" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 230 a 147 c 133 g 196 t ORIGIN 1 ggatgaggaa cgggccttga gagcaaaacc caaagaagcc gcacagggac atgagagccc 61 atgggggagc ctctaagtca cgagtaaatt ctcagttctc tacagtaaac tataaagatg 121 agcttcagtc attaggagag acgcacgggg cgctggggat gtcgctcagt ggagagtgct 181 tgcctgacat gccgaaggtt ctaggtacaa catccccaga accattagaa aataaaaata 241 aaaggaaact atcagaaagg aacacaagtt tactacgtaa ttcctaaatt cccagcccca 301 cccccacccc cgacctgcaa ttgctgcttt ttcctggaag aacacataat gatcttataa 361 taaatacgca ttctaggata ttctctgtct tcctaaccta tacttccaaa gtgttaatgc 421 cagattaatt ggcctgcaat atatgttacc cttgagcctt ataatattgt ctgatgtata 481 aggcaattga ttttgtttaa ttcactgaca ctccttaacc cacctgtcag ctgcctgaga 541 gcaaagatca tggtttatta tttttaatat cttttgctta ttcagtatct cctgttatgc 601 agtatttaac tggtggtaat agtaaaggaa aaagcttaaa agataataaa acagtaattt 661 tccaattcaa ttttaaaaat agcattactg aaatatccag taagca //