LOCUS BG085862 689 bp mRNA linear EST 12-MAY-2010 DEFINITION H3119A01-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3119A01 5', mRNA sequence. ACCESSION BG085862 VERSION BG085862.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 689) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG085862.1. Other_ESTs: H3119A01-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3119 row: A column: 01 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..689 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3119A01-5" /db_xref="taxon:10090" /clone="H3119A01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 200 a 151 c 164 g 174 t ORIGIN 1 gctatggatt ccagaagatt gaattgagtt caaggagcac acctttaatc tgggctacgc 61 ctttcatctg ggattaaggg tgtggtggac cacaccttta atctgggcta caccttctgc 121 tggagacaat ataaggacat tggaaaaagg gagtctagct cttgctcttg ctccttcgcc 181 tgcttgctgc gtgagactga gtaactgcta gatccttgga cttccattca cagctgcgac 241 tgaacaattg ttgggaattg agctgccgac ttgttgtgtg aaagcttcct tcaagattga 301 agcactccat tctgcaggaa gcatcttaag aaggaggata caagggcaac atctcagaga 361 caaagatgga acggtggtga ctacactgct gccttggtgc aaattcaccc cagctatcct 421 tgcaaagagt tctgaaaaac aaaatccttg accaaaaacg cactacacta agccatctcc 481 aagttcgaag cattcagcaa gtggtggcaa ggcagagcca tcagaagagg attcctaatt 541 tccatgacaa atatggaaat gctatattag caggtggagg catcttctgt gtttctatat 601 ggacatatac agctacacaa attggaatag actggaacct gtcccctgtt ggcagagtca 661 ctccaaagga atggagagat cagtagtca //