LOCUS BG085844 523 bp mRNA linear EST 12-MAY-2010 DEFINITION H3118F12-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3118F12 5', mRNA sequence. ACCESSION BG085844 VERSION BG085844.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 523) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG085844.1. Other_ESTs: H3118F12-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3118 row: F column: 12 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..523 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3118F12-5" /db_xref="taxon:10090" /clone="H3118F12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 165 a 95 c 78 g 185 t ORIGIN 1 ggttgcagaa ggttctttat ataaaactta tctaaaattt tcatatttca tctttgaaaa 61 tgtctaattg agaaaaatcc atgatatttt ctggtatgaa agtttgacag tattaatttt 121 tttatatttt cttaaatcat taaaccattt taatatatgt taactactaa taaatggttt 181 attctttcta actccatgta agcttttcca atgaagattg taataacaca tttttgttct 241 catttttcta cagataaatt tatatttaaa aataccaaaa aaaaaaatcc ctatgtatac 301 acaccacaca catacacaca cacagacaca cattcactta taagaaaatt atagaggacc 361 tgtagggtga gcccagccac ctgcgttttt agtactgtgt ctccaggctg cctgaggcct 421 cagctgttgt cattcgtgct gtgtgggggt gacatttctg cctgtagtga agatccttct 481 cagtgggttc ggaatattca cctcaccatg tttacagaga act //