LOCUS BG085823 625 bp mRNA linear EST 12-MAY-2010 DEFINITION H3118D06-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3118D06 5', mRNA sequence. ACCESSION BG085823 VERSION BG085823.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 625) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG085823.1. Other_ESTs: H3118D06-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3118 row: D column: 06 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..625 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3118D06-5" /db_xref="taxon:10090" /clone="H3118D06" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 151 a 148 c 164 g 162 t ORIGIN 1 cgcagcagct cagctcccat tcccaggcag cttggaacag ggactttggc aaataactgg 61 agcggcgttc gggttaggtt ctgaggcctt cagactggga ctgagctcca ccgccagcat 121 ctccgacagc tttcagactg ccgtgggcct tctctgttgc cgcgactctg tctgctcaac 181 cctgagaagt gatggatatt cttcacagag gagaattggt tgctgcaata ctccgcaacc 241 gatcacttgt ggaagaggaa gaccagcact tgaaactgtg ccttggaagt gaaatgggcc 301 tctcttccca tttgcagtct tgcaaggcag gaagtacacg catctttacc agcaacagcc 361 acagttctgt ggtgttacag ggctttgacc agcttcggct tgatggattg ctttgtgatg 421 tgacactgat gccaggtgat acagatgatg cttaccctgt gcacagagtc atgatggcat 481 ctgctagtga ctacttcaaa gctatgttca caggtggaat gaaagaacaa gagctgatgt 541 gcattaagct tcatggcgtg agcagagtgg gtctacggaa aattattgat ttcatctata 601 ctgcaaagct ttctcttaac atgga //