LOCUS BG085669 601 bp mRNA linear EST 12-MAY-2010 DEFINITION H3116B05-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3116B05 5', mRNA sequence. ACCESSION BG085669 VERSION BG085669.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 601) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG085669.1. Other_ESTs: H3116B05-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3116 row: B column: 05 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..601 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3116B05-5" /db_xref="taxon:10090" /clone="H3116B05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 152 a 167 c 187 g 95 t ORIGIN 1 ggaacccact cgtccacttc tctcagcgct tcctccagcc accagcccct gcccggatgg 61 cagcagtagt tctaggggga gacaccatgg gccctgagcg tatcttcccc aatcagactg 121 aggacttagg gccacatcag ggtcctacag aaggaactgg ggattggagc agtgaagaac 181 ccgaggaaga gcaggaggaa acaggagcag gcccagcagg ctactcgtac cagcccctca 241 atcaagaccc tgaacaagaa gaggtggaat tggcaccagt gggtgaagga gaagatggag 301 ctgctgacat ccaagatcgg atccaggccc tggggcttca tctgccagac cctccattgg 361 agagtgagga tgaagatgag gagggagccg ccgcattgag cagccacagc tctatcccca 421 tggacccaga acatgtagag ctggtgaaaa ggacgatggc tggagtaagc ctgcctgcac 481 caggggttcc tgcctgggct cgggagatct cggacgctca gtgggaagat gtggtacaga 541 aagccctcca agcccggcag gcatcccctg cctggaagtg accagagagc gagctgcctt 601 a //